Rhodamnia argentea (silver malletwood): 115730300
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Entry
115730300 CDS
T10595
Name
(RefSeq) CCR4-NOT transcription complex subunit 3 isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115730300
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
115730300
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NCBI-GeneID:
115730300
NCBI-ProteinID:
XP_030516815
UniProt:
A0A8B8N365
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Position
10:complement(16072293..16083289)
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AA seq
880 aa
AA seq
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MGASRKLQGEIDRVLKKVQEGVDVFDSIWNKVYDTDNANQKEKFEAELKKEIKKLQRYRD
QIKTWIQSSEIKDKKVSASYEQALMDARKLIEREMERFKICEKETKTKAFSKEGLGQQPK
TDPKEKAKSETRDWLNTVVGELETQIDIFEAEIEGLSVKKGKTKPPRLTHLETSITRHKA
HIIKLELILRLLDNDELSPEQVNDVKEFLDDYVDRNQEDFEEFSDVDELYSTLPLDKVES
LEELVTIGPPGLIKGTPLGLKTSLTATASQPTATTTASQQLVTPAQEQVEEATSHDGSSD
VSTKMPPAKISVVVSPSAAAATTGHTIPVASNIPSHSMAVPSTMSAGVTSVRVTSEIAGA
PSSSTAGLASPIKEEENGSHPARRSSPALADAGLVRGIGKGALSSQTLSNLPLSSSSVSS
NATLGAVPSASDITKRNILVTDDRLGSSGLVQPPVAPFGNRQVLPQNIKANDGSALVDPA
SVDNTAIAGRVFSPPVVSNMPWRPGSSFPQNEAVQLRGRTEIAPDQREKFLQRLQQVQQQ
GHSNLLGMPPLAGGNHKQFSPQQQNPLLPQFNAPIASVAPQVGLGLGLQTPGVNGAVAAT
IQQPSPIQQTSPQGTGLAKLEEQQQQQQQQNMPDESTESVAVTGIGKSTNDDDLKSPHPL
DASAGAAASFTEPSQVPRDTDLSPGQPLLSAQPSASLGVIGRKSVSDLGAIGDYLSGSTI
STSSGGMQDQLYNLQMLEAAYHRLPQPKDSERLRSYVPRHPALTPSSFPQVQAPIVNNPL
LWDRLGPDTLFFAFYYQQNTYQQYLAAKELKKQSWRYHKKYNTWFQRHEEPQIATDEYEQ
GTYVYFDFHVSNDDLKHGWCQRIKTEFRFEYNYLEDELMS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgagtcgaaagcttcagggagagatcgaccgagtgctgaagaaggtccaggag
ggcgtcgacgtcttcgacagcatctggaacaaggtttacgacacggacaatgcgaaccag
aaggagaagttcgaggccgaattgaagaaggagattaagaagctgcagaggtacagggat
cagatcaagacgtggatacagtccagtgaaatcaaggacaagaaggttagtgcctcttat
gagcaggctctgatggatgcacgcaagcttattgagcgtgaaatggagagatttaagatc
tgcgaaaaggagactaaaacgaaagcattctctaaggaagggctgggtcaacaacctaaa
actgatccaaaagagaaggctaaatcagagactagggactggttgaacactgtggttggg
gagttggaaacccagattgatatctttgaagctgagattgaggggctatctgttaagaaa
ggaaagacgaagcctcccagattgacacatttagagacatctattactcggcacaaggct
catataataaagttggagctgattttgagacttttggataatgatgaattgagtcctgag
caggtcaacgacgttaaggagttcttggacgattatgttgatcgtaatcaggaggatttt
gaggaattcagtgatgttgatgaactctatagcacattaccattagataaggtcgaatct
cttgaagaattggtaaccattggtcctcctggtctcatcaaggggacacccctaggctta
aagacttctctgactgccacagcatctcaaccaacggcgactaccacggctagtcaacaa
ctagttacaccagcccaggaacaagttgaggaggcgacctctcatgatggtagttctgac
gtatctacaaaaatgccacctgccaaaattagtgtagtggtctctccatcagcagcagca
gctactactggtcataccatacctgttgcatccaatattccttctcatagcatggcggtg
ccatcaactatgtcagcaggtgtaacttctgttcgagttacttccgaaattgcaggtgct
cctagttcatcaactgcaggccttgctagtcctatcaaagaagaggaaaatgggagccat
cctgctcgtcgatcatctccggctttggctgatgctggacttgtcagaggaataggaaag
ggggctctatccagccaaacattatccaatcttcctctttcgagcagttcagtttctagc
aatgcaacccttggtgcagttccttctgcttctgacataacaaagaggaatattttagta
actgatgatagactcggtagcagtggcttggtacagcctccagtagccccttttggcaat
agacaggttttgccacaaaacattaaggctaatgatggaagtgccttggttgatcctgct
agtgtcgataacacagcaatagctggcagagtattttcgcctcctgtggtgtccaatatg
ccatggaggcctggaagttcctttccccagaatgaagcggtgcagttgcgagggagaact
gaaatagcacctgaccagagggagaaatttttgcaacggctccaacaagtgcaacagcag
ggacatagcaaccttctgggcatgcctccactggcaggaggaaaccataagcagttctct
ccacagcagcaaaacccactcttgccgcagttcaatgctccgatcgcatcagttgctcct
caagttggtcttggattaggattacagacaccgggtgttaatggggcagtggctgccact
attcaacaaccaagtcccatccaacagactagtccacaaggaactggccttgctaaattg
gaggagcagcagcagcaacagcaacagcagaatatgcctgatgaatcaactgagtctgtt
gctgttaccggaattggcaagagcacgaatgatgatgatttgaaatctccacacccatta
gatgcttctgctggagcagctgcttctttcactgagccttctcaagtgcctagggatact
gacctatctcctggacaacctctgctgtccgctcaaccttctgcaagccttggtgtcatt
gggcggaagagtgtttctgatcttggtgctataggagattatctcagtggatcaactatt
agtactagtagtggaggaatgcaagatcagttatacaatctccagatgcttgaggctgca
tatcacagacttcctcaacccaaggactctgaacggctgaggagctatgttccgaggcac
cctgctctcacgccttctagctttcctcaagtacaggcaccaattgtcaataaccctctc
ctttgggatagattaggtcctgatacgctcttctttgcattttactatcagcagaacacc
tatcaacagtatttagctgcaaaagagttgaaaaagcaatcttggagataccacaaaaaa
tacaatacatggtttcagcggcatgaggagccacagattgcgactgatgaatacgagcaa
ggaacttatgtctattttgatttccatgtttcaaatgatgacctaaaacatggatggtgt
cagaggatcaagaccgagttcagattcgagtataactaccttgaagatgagttgatgtca
taa
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