Rhodamnia argentea (silver malletwood): 115730618
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Entry
115730618 CDS
T10595
Name
(RefSeq) autophagy-related protein 13b
KO
K08331
autophagy-related protein 13
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04136
Autophagy - other
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09140 Cellular Processes
09141 Transport and catabolism
04136 Autophagy - other
115730618
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rarg04131
]
115730618
03029 Mitochondrial biogenesis [BR:
rarg03029
]
115730618
Membrane trafficking [BR:
rarg04131
]
Autophagy
Autophagosome formation proteins
ULK complex
115730618
Atg1 complex
115730618
Mitochondrial biogenesis [BR:
rarg03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
115730618
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATG13
Motif
Other DBs
NCBI-GeneID:
115730618
NCBI-ProteinID:
XP_048141666
UniProt:
A0ABM3HYJ6
LinkDB
All DBs
Position
1:35731304..35735749
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AA seq
663 aa
AA seq
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MASSHSDSARMEQIITEFFAKSLHIILESRTPCISSRNFSGEQTVSSPSSSSSSSSSVRP
RDKWFNLALRECPEALENLDLWHQSNLEPMVVDVVLVKRAINWEPANFYPKTELFKNLSS
KELHTNCWNSDQEELGNERSEKIIERWIVQYEVRKAKDAGKGSKRSSSSILSSIYKKSML
LLRSLYLTVRLLPAYKIFRDLNLTGQIRSFSLAHRVSSFVEPFTRREEAEMQQFGFAPVD
TSSGRLCLSVLYRSSLSDVSSEPSTPMSPQLIPDYVGSPLADPLKRFPSLPVSHGSPSSL
PFSRRHSWSFDQYRASPPSRTFSPSPTHSEPYASASNPSSCRFPPPGLPPHPSEVSHAHK
DNASFDEYYPSPIFSPSLSPSPPIYVPGSNLSRALLRSESAPVNILATKFLNSPMLFKNQ
NFPPSPPLRGTRYGPSTADKSMCPSRDVATVDKMSFVGRDDIGRPSGLQLSSGSSAHISY
SRSSCRSFHDDFDESEYTCPFDVNEDDVTDSGSRVDLFDKRGHAHDPLQSASFLPIRKSP
GAAVGALVDMLKKAPPLHQDFSNMATASQASQASRSETWSNSFHEYCQTPKAISAQDGTS
SVTSSALLASKTTADALEELKGYQEMKNLLLSQGGTGRSQSVPNYAAAAAAVVESAGRGT
VKF
NT seq
1992 nt
NT seq
+upstream
nt +downstream
nt
atggcatcatcccactcggattctgcgcggatggagcagataatcactgaattctttgcc
aagagtctccacataatactcgaatcaaggaccccttgcatttcttcgcggaatttcagc
ggtgaacagactgtgtcctccccatcttcgtcctcttcttcctcttcaagcgtgagacca
agagataaatggttcaatttagctcttagagaatgccctgaggcgttggagaatctcgat
ctttggcaccaaagcaatcttgaacctatggttgttgatgttgttttggtgaagagagcg
attaactgggaaccagccaatttctatcccaagacggaactgttcaagaatttgtcatcg
aaagagctgcatacaaattgctggaactctgaccaggaggagctaggaaatgaaaggagt
gaaaagataatagaaagatggatagtgcagtatgaggtgaggaaggccaaggatgctggc
aaggggagcaaaagatcaagcagtagtatcttgtcatcaatttataagaagtcgatgttg
cttttaagatccttatacctaactgtccggctcttgccagcatataaaatatttcgggac
ctgaatttaactggtcaaattcgctctttctctcttgctcatcgggtttcttcttttgtt
gagcccttcacccgtagagaggaggctgaaatgcaacaatttggtttcgcccctgtggat
acttcatctggtaggctttgcctttcagtattgtatcgatcatcattatctgatgttagt
tccgagccatctaccccaatgtctccccagcttataccagattatgtgggcagcccatta
gctgacccgcttaagagatttccatcacttcctgtatctcatggctccccttcgtcattg
ccattctcaaggagacacagttggagttttgatcaataccgtgcctctccgccttccagg
actttctcgccttcaccaacccattctgaaccttatgcttcagcttctaaccccagttct
tgtcggtttcccccaccaggtttgccacctcacccatctgaagtatctcatgctcataag
gataatgctagctttgatgaatactatccctcccctatattttctccttctctctcaccc
tccccacccatttatgtacctgggagtaatctttcaagggctcttttacgatctgagagt
gctccagttaatatacttgcaacgaagtttcttaattcccctatgttgttcaagaaccaa
aactttcctccttcacctcctctcagaggtacaagatatggcccttcaacggctgataaa
agtatgtgtcccagccgtgatgttgcaacagttgataagatgtcctttgtcggaagggat
gacataggaagaccttctgggttacaactatcatctggaagttcagcacatatttcctat
tccagaagctcctgcaggtctttccatgatgattttgatgagtctgagtacacttgtcca
ttcgatgtgaatgaagatgatgtgacagattcaggtagcagagtggatttattcgataaa
agaggacatgcgcatgatccactccagtctgcttcgtttttgccaatcagaaaatctcca
ggtgctgctgttggagctcttgtggatatgttgaagaaagctcctcctcttcaccaagac
ttctcaaatatggcaacagcttcacaagcttcacaagcctccagatctgagacctggagc
aacagctttcacgagtattgtcagacccctaaagccatatcagctcaggatggcacttca
agcgttacatcctctgctcttctcgcatctaagacaacagctgatgctttagaagaactc
aagggttatcaggagatgaagaatttactgctttctcaagggggtactggtaggtcacag
agcgtgcccaattatgctgctgctgctgctgctgttgtagaatctgccggtagaggtacc
gttaaattttag
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