Rhodamnia argentea (silver malletwood): 115734314
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Entry
115734314 CDS
T10595
Name
(RefSeq) syndetin isoform X1
KO
K23288
syndetin
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rarg04131
]
115734314
Membrane trafficking [BR:
rarg04131
]
Protein recycling
Others
EARP complex
115734314
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Vps54_N
Syndetin_C
RNA12
Motif
Other DBs
NCBI-GeneID:
115734314
NCBI-ProteinID:
XP_030520907
UniProt:
A0A8B8NEL7
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Position
6:complement(21430296..21445518)
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AA seq
1109 aa
AA seq
DB search
MQTNLFPFGTVLGNPYLFNGDLSEGGFESSRVFFLVPFLLFQGGGMDLSKVGEKILSSVQ
SARLLGLLPSGSDRPEVPARAAAAAAVARALAGLPPHERFTLSSSSTELSSIYGSRLPGP
PVAELEEEFYEEEFDPVRHILEHIPGEENELAYFEKQATLRLAQLDRVAECLSRNVMEHH
EVMVKGMDLVRELEKDLKVATVICMNGRRHLTSSMNEVSRDLIVNSNSKKKQALLDMLPA
LTELRRALNMQMSLETLVEEGDYCKAFQVLSEYLQLLDGFSELSAIKEMSRGVEVWLGKT
LQKLDSLLLGLCQEFKEEGYLNVIDAYALIGDISGLAEKIQSFFMQEVLSETHTVLKSIV
LEDQEESQQSSRLTYSDLCRQVPESKFRHCLLTTLAVLFELMCSYHRIMSFQMDKKVLIV
QSSNPNQMEAGTSVNQVDTDAKVLNSQEEHVLQSEISDRVTSSSLPSDSPSTNSSRTTGT
FPVGTPDTDGVGRNDDGDASSSGSPWYQLRKDATNFLSQTLQRGRRNLWQLTTSRMSVLL
SSPAVCSTSIHQFLRNYEDLSVFILAGEAFCGFEAVEFRNKLKAVCDNYFLSFHRQNVYA
LRMVLEKENWLILPPDAAHIITFAGLVGDGAPLIVPFGANASLLHPNKSAKSVDIISKKS
MFSHWLQSGNPFLQKLTCGSKELQSAGGTNGSVSSEYDGQVNDCHDDKMSSRSAGANHVN
GHSASEEENEDLLADFIDEDSQLPSRISKPSFLKRHSQSNDEENTAQTGSSLCLLRSMDK
YARLMQKLEIVNVEFFKGICQLFEIFFHFVYETFGQQISYSSGKGFNESPNYRLKTALSR
IAQDCDQWIKPQPVSLSSSSPTSLNDVTPTSPNAAFGQLGLKERCAGADTLLLVARILHK
SKAHLQSMLLQNNAAVVDDFYMHMVDAVPDLVEYIHRTTARLLLHVNGYVDRIANAKWEV
KELGLEHNGYVDLLLGEFKHYKTRLLHGGIRKEAQDVLLDYGLEIVAETLIEGLSRVKRC
TDEGRALMSLDLQVLINGLHHFVSLNVKPKFQTVETFIKAFYLPETEYVHWARAHPEYTK
NQIVGLVNLVAAMKGWKRKTRLEVLEKIE
NT seq
3330 nt
NT seq
+upstream
nt +downstream
nt
atgcagacgaatctgttccccttcggcaccgtcctgggcaatccctatctgttcaatggc
gatttgagcgagggtgggttcgagagctctagggttttcttcttggttcccttcttattg
ttccaaggaggcgggatggatttgtccaaggtcggggagaagattttgagctccgttcag
tctgccaggttgctcggcctccttccttccggctccgatcgccccgaggttccagctcga
gctgctgcagcagcagctgtagctcgtgctttggcaggactgccccctcatgaaaggttc
actctctcttcaagttcaacagagttgagctcaatatatggaagcaggcttcctggtcca
ccagttgcagagctagaagaagaattctatgaagaggagtttgatccagtgaggcatatc
ttagagcacatccctggagaagaaaatgagttggcctattttgagaaacaggcaactctt
aggttagcacaacttgatagagtcgcagaatgcttgtcccgcaacgtaatggagcatcat
gaagtgatggtgaagggaatggatttggtgagggaacttgagaaggacttgaaggttgcg
actgtcatctgcatgaatggacggaggcatctgacctcctcaatgaatgaggtttcaagg
gatctaattgttaattctaattcaaagaagaaacaagcgcttttggacatgcttcctgct
ttgacagaacttcgccgtgcattgaatatgcaaatgtcacttgaaacacttgttgaagag
ggggattactgcaaggcatttcaagtgttgtctgagtatttgcagctcttggatgggttt
tcagagctttcagctataaaagagatgagccgaggtgttgaggtctggctgggaaaaact
cttcaaaagctggattctcttttgctgggtttgtgccaagaatttaaagaggagggctat
ctaaatgttatcgatgcctatgcactaattggggatatttctggtcttgctgagaagata
cagagcttttttatgcaggaagttctttcagaaactcacacagtgttaaaaagtattgtg
cttgaggatcaagaagaaagtcagcaaagcagtaggcttacctacagtgatctatgccgt
caagtcccagaatctaagttcaggcactgtctgctgacaactctagccgttttatttgag
ttgatgtgttcctatcacagaatcatgagctttcagatggacaaaaaggttttgattgta
cagtcttccaatccaaatcaaatggaagctggcacctctgttaatcaagtcgatacagat
gcaaaagttctgaattcccaagaagaacatgttttgcaatctgaaatttcagatagagtc
accagttcatctctgccgagtgactctcccagtacaaactcgtctagaactacaggtact
tttcctgtgggtaccccagacacagatggtgtgggaaggaatgatgatggtgatgcatca
agcagtggatccccttggtatcagctgcgaaaagatgcaacaaactttctgtcacaaacc
ctccagagaggacgcaggaatctatggcagctcacaacaagtcgtatgtctgttttgctt
tcttcccctgctgtttgttccacaagtattcatcaattcttgagaaattatgaagacctt
agtgtctttatcttggctggggaagccttttgtggatttgaagcagttgaatttaggaac
aagttgaaggccgtttgtgataattactttttgtcatttcatcggcaaaatgtttatgca
ctcagaatggtcttggaaaaggagaactggctgatattgcccccagatgctgcccatata
atcacttttgctggtttagttggtgatggagcacccttgattgtaccattcggtgctaat
gccagtttgctgcatcctaacaaatcagccaagtcagttgatattatttccaagaagagt
atgttttcccattggcttcagagcggaaacccattcttgcaaaagttaacctgcggctca
aaagaacttcaaagtgccggtggaactaatggctcagtctctagtgaatacgatgggcag
gttaatgattgtcatgatgataaaatgtcttcaagaagtgctggagccaatcatgttaat
gggcattcggcttctgaggaagaaaatgaagatcttctggcagacttcattgacgaggat
agtcaacttcctagccgaatttctaagcccagttttttgaaaaggcattcacagtcaaat
gacgaagagaacactgctcaaacaggatcttctctttgtcttttaaggtctatggataag
tacgcaagactaatgcagaagttggaaatagtgaatgttgagttttttaagggaatatgc
cagttgttcgaaatcttttttcattttgtttatgaaactttcggccagcaaatcagttat
tcaagtgggaaaggctttaatgagtctcctaactatcgactgaagacagctttatccaga
atagcacaagattgtgatcagtggataaaaccccaacctgtctcattgtcatcctcctca
cctacatcgttgaatgatgttacacctaccagtcctaatgcagcatttggccaattgggt
ctgaaggagaggtgtgcaggtgccgatactttattacttgttgctcgaatactacacaaa
tccaaagctcaccttcagtcaatgctcttacaaaataatgcagctgtagttgatgatttc
tacatgcacatggtggatgctgtaccggatcttgttgaatacattcatcgaacaactgca
agattgctgctccatgttaatgggtatgttgatcgaattgccaatgcaaagtgggaagtg
aaagaactgggcctagaacataacgggtatgttgatctgttgttgggagagttcaagcac
tacaagacaaggctcttgcatgggggaatccgcaaggaggctcaagacgtccttttggat
tatggacttgaaatcgttgctgaaactcttattgaaggtctgtcgagggtaaagaggtgt
actgatgaaggacgggctcttatgtctttggatcttcaggttttgataaatgggctacat
cacttcgtgtctctgaatgtgaagcccaagttccagacagtggaaactttcatcaaggct
ttctacctaccagagactgaatatgtacattgggcgcgagcccacccggagtacactaaa
aaccagattgttgggctggtgaacctggttgcggcaatgaaaggttggaagaggaaaaca
agattggaagttttagaaaagatcgaataa
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integrated database retrieval system
