KEGG   Rhodamnia argentea (silver malletwood): 115734437
Entry
115734437         CDS       T10595                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03030  DNA replication
rarg03410  Base excision repair
rarg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115734437
   03410 Base excision repair
    115734437
   03420 Nucleotide excision repair
    115734437
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rarg03032]
    115734437
   03400 DNA repair and recombination proteins [BR:rarg03400]
    115734437
Enzymes [BR:rarg01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     115734437
DNA replication proteins [BR:rarg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    115734437
DNA repair and recombination proteins [BR:rarg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      115734437
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 DNA_pol_B zf_DPOE_2 zf-DPOE DNA_pol_B_exo2 RNase_H_2
Other DBs
NCBI-GeneID: 115734437
NCBI-ProteinID: XP_030521084
UniProt: A0A8B8NGB1
LinkDB
Position
6:21640218..21658664
AA seq 2210 aa
MDGESRKRERPDSLSLRRQKQQQRSAEEELESKLGFDLFSEGEKKLGWLLTFAPSSWEDP
ETFKVYSCIDLYFVSQDGNSFKSKYKFRPYFYAATKEKVEMDVESYLRRRYESQIANIEI
VEKEDLDLKNHLSGLRRSYLRISFDTVQQLMNVKSDLLHIVERNRVKKEAAEAYESILMV
KREQKPQDFLDSIIDLREYDVPYHVRFAIDNDLRCGQWYDVSISSSGVMLERRTDLLQRA
EVRVCAFDIETTKLPLKFPDAEYDMIMMISYMVDGRGYLIINRECVGQDIENLEYTPKPE
FEGIFEVMNVKNEVELLRRWFAHMQELKPGIYVTYNGDFFDWPFLESRAAHHGFKMICEV
GFQCDKNQGECRCKFACHLDCFAWVKRDSYLPQGSQGLKAVTKAKLGYDPLEVNPEDMVR
FAKDKPQMMASYSVSDAVATYYLYMTYVHPFIFSLATIIPMSPDEVLRKGSGTLCEMLLM
VQAYKANVICPNKHQAELEKFFKNRLLESETYIGGHVECLESGVFRSDIPTYFKLDPAAY
EQLINNLDRDLQYAIRVEGKMDLESVCNYDEVKNAIREKLQKLQDEPVREESPLIYHLDV
AAMYPNIILTNRLQPPSIVTDEVCTACDFNRPGKTCLRKLEWVWRGETFMAKKSDYYHLK
RQIESEIVDMSDGQLSKSFLDLPKAEQQTKLRDRLKKYCQKAYKRVLDKPVAELREAGIC
MRENPFYVDTVRSFRDRRYEYKGLNKVWKGKLSEAKASGNSIKIQEAQDMVVLYDSLQLA
HKCILNSFYGYVMRKGARWYSMEMAGVVTYTGAKIIQNARLLVEKIGKPLELDTDGIWCA
LPGSFPENFTFQAKDSKRKLTISYPCVMLNVDVARNNTNDQYQTLTNPINKTYTTHSECS
IEFEVDGPYKAMILPASKEEGILIKKRYAVFNDDGTLAELKGFEIKRRGELKLIKVFQAE
LFDKFLHGSTLEECYSSVASVANSWLDLLDNQGKDIADSELLDYISESSTMSKSLVDYGG
QKSCAVTTARRLADFLGEAMVKDKGLRCQYVVACEPRGTPVSERAVPVAIFETDIEIMKY
YIRKWCKISSDVGIRSIIDWSYYKQRLSSAIQKIITIPAAMQKVANPVPRVVHPDWLHKK
VREKDDKLRQRKLVDIFALKNKGDAPNEGPGDISPNHIMNQKNVEDLEDFGNNKGSSINR
PTPVVRYYESTSERHPAKLMCQADGHQEESRVINNELQELLSLQQHAVSAENIDRNIDYQ
GWLEMKKRKWKDALDKRKRRRLGNLKTPSIRNGVSKQPAGKKNHIEANGRQGVSSYFTRH
EGALTRCHWQIIQLVPSTMSGQLFAWVIVDGIMLKIPIVVPRVFYLNSKASKTEEFPGRR
VNKILPHGRHSYNLVEVTTDEDQFTIESKKLTSLLADPEIEGVYETKVPSDFGAILQIGC
VCKVDKTVKKRNAQDSWCLTELHMKTTAECSYLEQSISFFYLYHSMSEGRAIFACYLPAL
RTISVTVVNPHQNRDLSASFLERQYREACQALAVELPTPQDGINFKVDYVGYVKDAEKIL
QRVINDHRHEHHGPTIAVIECPNIQSIKSGIRALDQFPCVSIPPNARDSQYQFLGWQQIA
AKVGMQRCAASTQWLKERISLSRYAHVPLGNFEVDWLIFTADVFFSRALRDQQQVLWISD
DGIPDLGGIHEEDTCFADEVHQNVLTYPGAYRKVSVELKIHHLAVNALLKSNQVNEMEGG
ALLGFDPELYSETDQQYSIDDTTTCAAAFRVLKQLVQRCLADAVTYGNVYADAILQHAYR
WLCSPQSKLHDPALHRMLHKVMQKVFALLLAEFRKLGATIIFANFSKLIIDTGKYELSAA
QAYCDSLLRTLQNRDLFEWIEMEPVQFWHSLLYMDQYNYGGIPVRVDVNVDEPQVDIVSS
WNIAECLPKKIQDHFIFIVSQFLYMPWNHAQKLAANRSSSDAGDLCTPSVTISAANNIES
HMAEYLREQIGSYFSDKLLGVVRDCIRHMREMDGHRDDEYSSPASANHRGDAALEFIKHI
CAVLALDQNVQHDILVMRKNLLRYVRVKEFAPEAEFRDPCQSFVLPNVICSYCNDCRDLD
LSRDSALLAQEWCCVVPQCGQPYDREVMENALLQIVRQRERIYHLQDLTCLRCNQVKAAH
LSEQCTCAGSFRCKEDASEFRSKMQIFLKIAAHQSFQLLRECTSWILEVK
NT seq 6633 nt   +upstreamnt  +downstreamnt
atggacggcgagagccggaagcgcgagcgtccagactcgctgagcttgaggaggcagaag
cagcaacagcgatctgccgaggaggagctcgagtcgaagttaggattcgatctcttctcg
gaaggcgagaagaagctcggctggttgctcacgttcgctccttcatcgtgggaggaccct
gaaacattcaaagtctatagttgtatcgatctttattttgtttctcaggatggtaacagt
ttcaagtcaaagtacaagtttcgtccttacttttatgctgcaacaaaggagaaagtggaa
atggacgttgagtcttatttaagacgaagatatgaaagccaaattgctaatattgagatt
gtggagaaggaggaccttgatttaaaaaaccatctctctggattgcggagatcatatctt
agaatatcctttgatactgttcaacaattaatgaatgtgaagagcgatcttctgcacatt
gttgaaagaaaccgggtaaagaaggaagctgcagaagcatatgaatctatattgatggtg
aagagagaacaaaaacctcaagattttcttgattctatcattgacctccgagaatatgat
gtgccataccatgtacgctttgctatcgataatgatttgcgatgtggacaatggtacgat
gttagtatatctagttccggtgtcatgcttgagaggagaactgacctacttcagcgtgcc
gaagttcgtgtttgtgcatttgatattgagaccacaaaactacccttgaaatttcccgat
gctgaatacgatatgatcatgatgatttcatacatggtggacggaagaggttacctaatt
atcaacagagagtgtgttggacaagatatagaaaatctcgagtacaccccaaaaccagaa
tttgaaggaatttttgaagtgatgaatgtgaaaaacgaggtagaactccttcgtcgctgg
tttgcccacatgcaagagctgaagcctggcatatatgtcacgtataatggtgactttttt
gactggccgttcttggagagcagagcagcccatcatgggttcaaaatgatctgtgaggta
ggatttcaatgcgataaaaaccaaggggaatgccgctgtaaatttgcctgtcatctggat
tgttttgcttgggtcaaacgtgacagttatcttccccagggtagccagggtctgaaggct
gtgacaaaggcgaagttgggttatgatccccttgaagtaaatccagaagatatggtgcgg
tttgcaaaagataagcctcagatgatggcttcatattctgtttctgatgctgtcgcgaca
tattacctgtacatgacctatgttcacccattcattttctctcttgcaactataatcccc
atgtcacctgatgaggttctccgcaaaggtagtgggaccctttgtgaaatgcttcttatg
gttcaggcatacaaggccaatgttatatgccccaacaagcaccaagccgagctagagaag
ttttttaaaaatcgccttcttgagagtgagacatacattggaggccatgtggagtgcctt
gagagcggcgtttttagatccgatattccaacttactttaagcttgatccagctgcatat
gagcaactcattaacaaccttgaccgcgaccttcagtatgcaatcagagtagagggtaaa
atggatttggaatcagtctgtaattatgacgaggtgaagaatgctattagggagaagctt
caaaaattgcaagatgaaccggtacgtgaagagtctcctctcatttaccatctggatgtg
gctgctatgtatccaaatattatattaacaaacagacttcagccaccgtcaatagtcact
gatgaggtatgcacagcatgtgacttcaatcgtccaggaaaaacttgtctccgaaagctt
gaatgggtttggcgtggggaaacttttatggcaaagaaaagcgactattaccatttgaag
aggcagatagagtctgagattgttgatatgtcagatggacaattatccaaatcatttctt
gaccttcctaaagcagagcaacaaacaaagcttagagatcgtcttaagaaatattgtcag
aaggcatataaaagggtacttgacaagccagtcgctgaacttcgagaagcagggatatgc
atgcgggagaatccattctatgtagatactgtccgcagctttcgtgatagaaggtatgag
tacaaaggacttaataaagtctggaaggggaagctgtcagaagctaaggctagtggcaat
tctataaaaatacaggaagcacaagacatggtggtgctctatgattcgctccagctagct
cacaagtgtatacttaattccttctatggatacgtcatgcgaaagggagcaaggtggtac
tccatggaaatggctggagtagttacgtatactggagcaaaaatcattcagaatgctcgc
ttgctggtagaaaaaattggaaaaccacttgaattagacacggatggtatctggtgtgcc
ctccctggatctttccctgagaatttcactttccaggcaaaggattcaaaaagaaagctt
accatctcttacccatgtgttatgctcaacgttgatgtggcaaggaacaatacaaatgat
cagtaccagactcttaccaatccgatcaacaagacatataccactcacagtgaatgctcc
attgaatttgaagtggatggaccatacaaggcaatgattctcccagcttctaaggaagaa
gggatcttaattaagaagcgttatgctgtttttaatgatgatgggacccttgctgagctg
aaaggttttgagatcaagcgtagaggtgaactcaagcttatcaaagtgtttcaggctgaa
ctttttgacaagtttcttcatggttcaaccttagaagagtgctactcatcagttgcctct
gttgcaaacagctggcttgatcttcttgataatcaagggaaggatattgcagatagtgaa
ttgctggattacatatcagagtcaagcaccatgagcaaatccttggttgactatgggggg
cagaagtcttgcgcagtgactactgctagacgtttagctgattttcttggtgaagctatg
gtaaaagacaaaggcttgcgctgccaatatgtagtcgcatgtgaaccgagggggacacct
gtcagcgagcgtgctgtccctgttgcaatattcgaaactgatattgaaataatgaagtat
tacataagaaaatggtgcaaaatatcctcagatgttggcatcagatcaatcattgattgg
tcctattacaagcaacggctcagttctgccattcagaaaattataaccattcctgctgca
atgcagaaggttgcaaatcctgttcctagagttgttcatcctgattggctgcataagaag
gttcgtgagaaggacgacaagttacgccaacgtaaactagttgatatttttgccttgaaa
aataagggtgatgcaccaaacgaaggtcctggtgatattagccccaaccatataatgaat
caaaagaatgtggaagatttagaagattttggaaacaataaaggaagttctataaacagg
ccaacaccagttgttcgttactatgaaagtaccagtgagaggcatccagccaaattgatg
tgccaagcagatggccatcaggaagaatccagagttataaataacgagcttcaagaactt
ttgtcattgcagcaacatgctgtgtctgcagaaaatattgacagaaacattgattatcaa
ggatggcttgaaatgaaaaagagaaagtggaaagatgcgctagacaagagaaaacgacga
aggttgggcaacttgaagactccatccatccgaaatggtgtttccaaacagccagctggt
aagaaaaatcatatagaagccaatgggagacaaggggttagctcatactttacaaggcat
gaaggagccctgacaagatgtcactggcagattatacaactggttccaagtacaatgagt
ggacagctttttgcttgggtgattgttgatggaattatgcttaaaattcctattgttgtt
cctagagtgttttacctcaactctaaagcatcaaaaacagaagaatttcctgggaggcgt
gttaacaagattctgccccatgggaggcatagctataacctagtagaggttactacagat
gaagatcaattcacgattgaaagcaaaaaacttacatctctacttgcagacccagagatt
gagggagtatatgagacaaaagtgccttcagactttggtgctatcctgcagattggatgt
gtctgtaaagtagataaaacggtgaagaaacgaaatgcccaagacagttggtgtctaact
gaattacatatgaaaactacagcagagtgctcttatctggagcagtccatctcgttcttt
tatttgtaccatagcatgtccgaaggacgagctatatttgcttgctatcttcctgcattg
agaacaatatctgtcactgtggtaaatcctcaccagaatagagatctatcagcatctttt
cttgaaagacaatatcgggaagcttgccaagctttggctgttgaactccccaccccacag
gatggtatcaatttcaaggtggattacgttggatatgtgaaagatgccgagaagattctg
caacgggttataaatgaccacagacatgaacatcatggacctacaattgctgtcatcgaa
tgccccaacattcagtcaatcaaatctggtatacgagcactagatcaattcccatgtgtg
agcattcctcctaatgctcgtgatagtcaataccagtttcttggatggcaacaaatagct
gcaaaagtcggaatgcagcgttgtgctgcatcaacccagtggttgaaagaaagaatctct
ctctccagatatgctcatgtgcccctggggaactttgaagttgattggctcatatttaca
gcggacgtcttcttttcaagagcattgcgagatcagcaacaggtgctttggatatctgat
gatggtattccagatcttggaggaatccatgaggaagatacttgttttgcagatgaggtc
catcaaaatgttcttacctatcccggtgcctataggaaagtgtctgtggagctaaagatt
caccacctagctgtgaatgctcttctgaaaagcaaccaggtgaacgaaatggaaggaggt
gctctattgggctttgacccggagttatattcagagacggatcaacagtacagcatcgac
gatacaactacatgtgcagctgcattccgcgtgctgaaacagttagttcagaggtgcctt
gcagatgcagttacctatggaaatgtctatgctgatgcgatattgcaacatgcttatcga
tggctttgcagcccacaatcaaaacttcatgacccggcccttcatcgcatgctccacaag
gtcatgcaaaaggtatttgcattgttgttggcagagtttcgcaaacttggtgccacaatc
atattcgcaaacttctcaaagctcattattgatactggaaaatatgagttatcagcagcc
caagcttattgcgatagtttgctaagaactcttcaaaatagagacttatttgagtggatt
gagatggaaccggtacaattctggcattcattactttatatggatcagtataattatggt
ggaatccctgtcagagttgatgtaaatgttgatgaacctcaagttgatattgtgtcaagc
tggaatattgctgaatgcttgcccaagaaaattcaggatcactttatcttcattgtctct
cagttcttgtacatgccttggaatcatgcacaaaaattagctgcaaataggtcatcttca
gatgctggcgacttatgtactccatcagtcacaatttctgctgctaataatattgaatcc
cacatggcggaatatctcagagagcagattggctcttacttctctgataagctcttggga
gttgttcgtgattgcatccgtcacatgagagaaatggacggacatcgggatgatgagtat
tcatcacctgcttctgctaaccacagaggagatgctgctttggagttcatcaagcacatt
tgcgcggttcttgctctggatcaaaatgttcagcatgatattctggtgatgagaaagaat
cttttaagatacgtacgcgtaaaagaatttgctccagaagctgagttccgtgatccttgc
caatccttcgtcttacccaatgtgatatgcagctactgcaacgactgcagagaccttgac
ttgtcgcgtgactcagctctgttagctcaagaatggtgttgtgtcgtaccacaatgtggc
cagccttacgatcgtgaagtgatggagaatgcgcttctccaaattgtacggcagagagaa
cgcatctatcacctacaagaccttacttgcctacggtgcaaccaggtgaaagccgcacat
ttaagtgagcaatgcacgtgcgcaggctcatttcggtgcaaagaagatgcttccgagttc
cgcagcaagatgcagatatttctaaagatagctgcacatcagagttttcagcttcttcgc
gaatgcacctcgtggattttagaagtgaaataa

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