Rhodamnia argentea (silver malletwood): 115734757
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Entry
115734757 CDS
T10595
Name
(RefSeq) NF-X1-type zinc finger protein NFXL1-like
KO
K12236
transcriptional repressor NF-X1
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rarg03000
]
115734757
04121 Ubiquitin system [BR:
rarg04121
]
115734757
Transcription factors [BR:
rarg03000
]
Eukaryotic type
Zinc finger
Other zinc fingers
115734757
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
NFX1 proteins
115734757
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_NFXL1
zf-NF-X1
R3H
NCBP3
Motif
Other DBs
NCBI-GeneID:
115734757
NCBI-ProteinID:
XP_030521518
UniProt:
A0A8B8NH83
LinkDB
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Position
7:23912255..23916735
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AA seq
1064 aa
AA seq
DB search
MSFRVQQNQRGSRRFPSQVAPQEWVRSGISPSAAILNSPSSSDSNPTIDSASSDCPSWLR
GNTSNLNGSYGETACTSGHRASHGSKVHWSRLNGQKKERGNERTVMDERKSLKDENLPQL
AQEIQQKLMKGTVECMICCDMVRRTAPIWSCSSCCSIFHLNCIRKWARAPTSSDLSVEKN
GGVNWRCPGCQKVQLTSSNEIKYLCFCGKRTDPPSDFYLTPHSCGESCGKPLQGRASSVD
EAEDDLCPHVCVLQCHPGPCPPCKAFAPPQPCPCGKEIITTRCSDRKSLLTCGQKCGKLL
ECGRHWCEEICHMGPCDPCHALFDASCFCKRKVQVVPCGDMDLKGELEAEQGVFSCGSTC
GEELGCGNHKCHEICHPGPCGECESLPSRVKTCCCGKTDLPEERRSCLEPIPTCSETCDK
SLTCGIHRCKDTCHAGDCAPCLVPMIQKCRCGLTSRTVLCHKMKDEIFMCEKQCGGKKNC
GRHRCSDRCCPQSSSDTTQHFCTLVCDKKLRCGQHSCEVLCHSGHCPPCLRSIFTDLSCA
CGRTSIPPPLPCGTPPPLCLLPCSVVQACGHTPSHSCHFGDCPPCSVPVVKQCIGGHVLL
RNIPCGSSNNITCNKLCGKTRRCGLHACGRTCHPAPCDTDAPDESHLRASCGQVCGAPRR
ACRHVCKSPCHPSYPCPDVRCEFIVTIVCSCGRIKANVPCDAGGNDNSYVGEGSLIQKLP
PLQHLEASSGRIPLGQRKLMCDDECAKLERKRVLADAFNIVSPNLDALRMKENSELVADL
FRRDPKWVLSVEDRCKFLLHGKNMGSATKVHVFRPMHKEKREAVRLIAERWKLAIHEVGR
EQKCCTVIRVTPKSKAPARVLSAKGSMNVSALNPPTFDPLVDMDPRYVVSFFDLPRELDM
SALVLRFGGECELLWLNDKNALAVFSNMTRAATAMRALDHGSVYYGAVAFLQNRASSSQS
FGTNAWRGPAFADMSGGSWKKVVVQEPGGPNDSWDDGEGWSITSATVKGKEAPISASATA
RNVSNAGSEMKLTGVSDLEGQHDVASHETDDTVDVADDWETAYA
NT seq
3195 nt
NT seq
+upstream
nt +downstream
nt
atgagctttcgagtccaacaaaatcaaagagggtctagaagatttccttctcaagttgct
cctcaagagtgggtacgaagtggaatatctccaagtgctgcaatattgaactcaccatcg
agttcggattcaaaccccaccatagatagtgcgagttctgattgtcccagttggcttaga
ggcaacacttcgaacttaaatggcagttatggagaaacagcttgtacttcaggacacaga
gctagtcatggctcaaaagttcattggagtcgcctcaatggacaaaagaaggagagggga
aatgaaaggacggttatggatgaaaggaagagcctgaaggatgagaacttgcctcagcta
gcccaggaaattcagcagaagcttatgaagggcactgttgaatgcatgatatgttgtgat
atggttcgcagaactgctcccatttggtcgtgctcgagctgttgctccatatttcacttg
aactgtatcaggaagtgggctcgtgcgcccacctcttcagatctgtctgtggagaagaat
gggggtgttaactggcggtgccctggatgtcaaaaggtgcagctcacgtcttcaaacgag
atcaaatatctatgcttctgtgggaagaggacggatcctccctctgatttctatttgacg
ccacattcgtgtggcgaatcttgcgggaagccattgcagggtcgggcgtcaagtgttgat
gaggctgaagatgatttgtgtcctcatgtctgtgtcttgcaatgtcatcctggtccatgc
cctccttgtaaggcatttgctccgccacagccatgcccttgtgggaaagaaataattacg
acacgatgctctgatcgaaagtctcttcttacttgcggtcagaaatgtggtaagctactt
gaatgtggacgccattggtgtgaagagatttgccacatgggcccttgtgacccttgccac
gctctgtttgacgcttcttgtttctgcaagaggaaggtacaggttgttccatgtggcgac
atggatttgaaaggagaactagaagctgaacaaggtgtgttctcttgtggttcaacttgt
ggagaggagcttggttgtggcaatcacaaatgccacgagatctgccatcccggtccttgc
ggggaatgtgaatcacttcctagtagggtcaaaacttgctgttgtggcaaaactgatctg
ccagaagaaaggcggagttgtttggagccaattccaacatgttcggagacctgtgacaag
tccctaacatgtggaattcaccggtgtaaagacacgtgccacgccggagattgcgcaccg
tgcttagttcctatgatccagaaatgccgttgtggcttgacttcacgtacagtgctgtgc
cacaagatgaaggatgaaatatttatgtgtgagaaacagtgtggtggcaagaagaactgt
ggcaggcatagatgcagtgaccgttgctgccctcaatccagttctgacacgactcaacat
ttttgcaccctggtatgtgataaaaagctcagatgtggacagcactcgtgtgaagtgctg
tgtcacagcgggcattgccctccttgcctccgaagcatctttaccgacttaagctgtgct
tgtggtagaacttctatcccacctccattgccttgtggcactcctccgcctttgtgtctg
ctcccctgttccgtcgtccaagcttgtggtcacacgccttctcacagctgccacttcggg
gattgtccgccttgctcagtgcctgtggtcaagcagtgcattggtgggcatgttcttctc
aggaacataccttgtgggagctctaataacatcacgtgcaacaaactatgcggcaagacg
aggcgctgtggtttgcatgcgtgtggtcgcacttgtcatccggcaccttgcgacaccgat
gcccctgatgaatcccacctgagggcttcgtgtgggcaagtatgcggtgctccaaggagg
gcctgtaggcatgtgtgtaaatcaccttgtcacccttcatatccttgtcctgatgtgaga
tgcgagttcattgtcacaatagtgtgttcttgtgggcggattaaggctaacgtcccatgt
gatgctggagggaatgataatagttatgtaggtgaaggttctcttatccagaaattgcct
ccacttcaacatttggaggcctcttctggaaggatccctcttggacagaggaagctaatg
tgtgatgatgagtgtgctaagttggaacggaagcgggtccttgcggatgcttttaacatt
gtttctccgaacttggatgctcttcgcatgaaagagaactccgagttggtggcagacctc
ttcaggcgtgatcccaaatgggtgttgtctgtcgaggatagatgcaaattcttgttgcat
ggcaagaacatggggagcgcgaccaaggtccatgtgttccgtccaatgcataaggaaaag
agagaggcggtgaggctcatagcagagaggtggaagctcgcaatccatgaggttgggcgg
gagcagaaatgctgtacagttattcgtgtcacgcctaaatcgaaagcgccggctcgtgtg
ctcagtgccaagggctcaatgaacgtgagtgcgctgaacccaccaacctttgaccctttg
gtggatatggatccgaggtatgttgtctctttctttgacttgcctagggaattggatatg
agcgcattggtcctaaggttcgggggagaatgtgagctgctttggttgaatgacaagaat
gcattggctgtattcagcaacatgactcgagcagcgactgctatgagggctttggatcac
ggatcagtatattatggggcagtcgcatttcttcagaacagggcttcatcttctcaatca
ttcggcacaaatgcatggcgagggcctgcatttgctgatatgagcggcggctcatggaag
aaggttgtagttcaggagcccggtgggccaaatgattcatgggacgatggtgaagggtgg
tccatcacttctgccaccgtcaaaggaaaagaagctccgatttctgcatctgcgacggcc
cggaacgtctcaaatgctggttccgagatgaaattaacaggcgtttcagatttggaagga
cagcatgatgtagcttcacatgaaaccgacgacacggtcgatgtcgctgatgattgggag
actgcttatgcttga
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