Rhodamnia argentea (silver malletwood): 115734856
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Entry
115734856 CDS
T10595
Name
(RefSeq) histone deacetylase 6
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03082
ATP-dependent chromatin remodeling
rarg03083
Polycomb repressive complex
Brite
Enzymes [BR:
rarg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115734856
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
115734856
HDAC complexes
Sin3A-HDAC complex
115734856
BRAF-HDAC complex
115734856
REST complex
115734856
SHIP complex
115734856
MiDAC complex
115734856
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
115734856
Heterochromatin formation proteins
Other heterochromatin formation proteins
115734856
Chromatin remodeling factors
NuRD complex
115734856
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115734856
NCBI-ProteinID:
XP_048138766
UniProt:
A0A8B8NGS6
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Position
7:21249775..21274253
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AA seq
470 aa
AA seq
DB search
MVDSSGGASLPSVGQDARKRRVSYFYEPTIGDYYYGQGHPMKPHRIRMAHNLIVHYYLHR
RMEISRPFPAATTDIRRFHSDDYVHFLSSVTPETVSDPAFSRLLKRFNVGEDCPVFDGLF
GFCQASAGGSMGAAVKLNRGDSDIALNWAGGLHHAKKSEASGFCYVNDIVLGILELLKVH
RRVLYVDIDVHHGDGVEEAFYTTDRVMTVSFHKFGDFFPGSGHIKDTGAGLGKNYALNVP
LNDGVDDESFRGMFRPIIQKVMEVYQPDAVVLQCGADSLSGDRLGCFNLSVKGHADCLRF
LRSFNVPLMVLGGGGYTMRNVARCWCYETAVAVGVEPENDLPYNEYYEYFGPDYTLHVEP
CNTENLNAPKDLERIRNMLLEQLSRIPHAPSVPFQMTPPITQEPEEAEEDMNERPKQRIW
NGEDYESDAEQDKSRHRSSTADALHDENVEMRDSVGENNGGEIREDRPPS
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atggtcgacagcagtggcggcgcgtcgctgccatcggtggggcaagacgcgcggaagagg
cgcgtgagctacttctacgagccgacgatcggcgactactattacgggcagggccacccg
atgaagccccacaggatccggatggctcacaacctcatcgtccactactacctccaccgc
cgtatggagatcagccgccccttccccgccgcgaccaccgacatccgacgcttccactcc
gacgactacgtccacttcctctcctccgtcacccccgagaccgtatccgaccccgccttc
tcccgcctcctcaagcgtttcaatgtcggcgaggactgcccagtcttcgacggcctcttc
ggcttttgccaggcctccgccggcggctccatgggcgccgccgtcaagctcaaccgcggc
gattcggacatcgccctcaattgggcgggcgggctgcatcacgccaagaagtcggaggct
tctgggttttgctatgtcaacgatattgtgctcggaattcttgagctcctcaaggttcac
aggcgagttctttacgtggatatcgatgttcatcatggggatggggtggaggaggcattt
tatacaacggatagagtcatgaccgtgtccttccataagtttggggacttcttccctgga
agcgggcacattaaggacaccggggcagggcttgggaagaactacgccctcaatgtgcca
ctaaatgatggcgtagatgatgaaagttttcgtggcatgtttcgccccattatccaaaag
gttatggaagtatatcaaccagatgccgttgttcttcagtgtggggctgattcactctct
ggtgaccgattgggatgtttcaatttgtctgtgaaaggtcatgcagattgcctccgtttt
ctaagatcttttaacgttcctttaatggtcttgggtgggggaggttatacaatgagaaat
gtcgctcgttgttggtgttacgagactgctgttgcagtgggagtggaacctgaaaatgac
ttgccttacaatgagtattatgagtactttggccccgattatactcttcatgtcgagcca
tgtaacacggagaatcttaatgcaccgaaagatttggagagaatcaggaatatgttacta
gagcagctatcaagaatcccccatgcaccaagtgttccttttcagatgacgccacccatt
acacaagagccagaagaggctgaggaagatatgaatgaaaggccaaagcagcgcatttgg
aatggtgaggattatgaatcagatgctgaacaagacaagagtcgacatagatcatcgact
gctgatgctttgcacgatgaaaatgttgaaatgagggacagtgttggcgaaaacaatggg
ggcgaaataagggaagaccgtccaccatcttga
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