Rhodamnia argentea (silver malletwood): 115734914
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Entry
115734914 CDS
T10595
Name
(RefSeq) uncharacterized protein LOC115734914
KO
K14315
nucleoporin NDC1
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115734914
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115734914
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115734914
BRITE hierarchy
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GFIT
Motif
Pfam:
Ndc1_Nup
Motif
Other DBs
NCBI-GeneID:
115734914
NCBI-ProteinID:
XP_030521772
UniProt:
A0A8B8NH19
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Position
7:24071741..24076436
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AA seq
539 aa
AA seq
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MPTLPPETIPRKRFLGFLIWQSIPTTLLFFLFKAAISAFAPTTRPRSRASSILGFLLCFV
SFELSQLLFSASLSFLSSPQPDRPASPLELGLGLVRLVVESRTASPELRRRARVSLTIAT
FVVACAVSSFLSVAAVCWGVSSGDSIGRVVGFRGFVVGLLYGVLYVYKRRWVLKFPIVQR
TLYFSFKMGLPTAARNSFKFSGAAYVFSSLLLAFLPDHHYVRASMGRFLLEQIIFYMGTL
AVFLCWELIHHLHQVLHTKRFIFAPPRGSAAAETNPSEPLLAALEESHPSALVHYLAYLD
LCMVCENNVDTWRRAAFFEETGDTYKRVIAVCLRPLEKLASKLAEGLETSADKSYPLSNQ
LLSPADFQLDSSCYEPIHHYQLYAWCARAAASLTVHSHEEDRYGVAQLSGSNAAVLSTLL
SCLLAVESFMGKRTHLQSQHHFMGASGIKWATPNAGRRYFPSSTVGKRRGSPLHSKAYAI
ADVLRTSIYQIVSAFHDEMLASAKSGNLEKEWTINAKPPFGTRDLLLQKLHLFLDFRAS
NT seq
1620 nt
NT seq
+upstream
nt +downstream
nt
atgccaactttgcctcctgaaaccatccccaggaagagattcttagggtttctcatatgg
caatcgatacccactacgcttctcttcttcctcttcaaagccgcgatttctgctttcgct
ccaaccactcgcccccgcagcagagcgtcgtcgatcctcggtttcttgctctgtttcgtc
tccttcgagctctcgcagctcctgttctccgcttctctctccttcctttcctctccgcag
cctgatcgccccgcttcgccgctcgagctcgggctcgggctcgtccggttggtggtcgag
tcgcggacggcgtcgcccgagctgcggcggcgagctagggtttcgctaaccatcgcgacg
ttcgtcgtggcgtgcgcggtgtcgagtttcttgtcggtggcagcggtgtgttggggggtg
agttcgggggattcgattgggagagtagtggggtttagaggtttcgtagttgggctgttg
tatggggtgttatatgtttataagcgcagatgggtattgaagtttcccattgttcagcgg
acactatatttcagcttcaagatgggattgcctactgctgccagaaattcttttaaattt
tccggcgctgcctatgtattttcatctctgctgttagcatttctccctgatcatcactat
gttcgggctagcatgggaagattcttgcttgagcaaattatcttttacatggggactctt
gctgttttcctttgctgggaattgattcatcatttgcaccaggtcttacacacaaagagg
ttcatatttgctcccccaagagggtcggctgcagcagaaacaaatccaagcgaaccactt
cttgcagctttggaggaaagtcacccaagtgctcttgttcactatcttgcttatctggat
ctctgcatggtttgtgagaataatgtggatacttggcggcgagctgctttctttgaagaa
actggtgacacttacaaaagagttatagcggtatgcctgaggcctttggaaaagcttgca
tcaaaattagctgaaggtctagaaacttctgctgataaaagctacccactttcaaatcag
ttactctcccctgccgactttcagctagattcatcttgctatgaaccaatacatcattat
cagttgtatgcatggtgtgccagagctgctgcctctctgaccgtgcactcacatgaggag
gacagatatggtgttgctcagctttctggcagcaatgctgctgttttatctaccctattg
tcttgccttcttgcggttgaatcattcatggggaagaggacccacttgcaatcccagcac
cactttatgggagccagtggtattaaatgggcgacgccaaacgctggaagaaggtatttt
ccgtccagtaccgtgggtaagagaaggggttctcctctgcattcaaaagcatatgctatt
gctgatgttcttaggacatccatttaccaaatagtgtctgccttccacgatgaaatgctt
gccagtgccaaatctggcaatcttgaaaaggaatggaccatcaatgcgaagcctccattt
ggcactcgtgatcttctcttgcagaaattgcatctcttcttggattttcgggctagctaa
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