Rhodamnia argentea (silver malletwood): 115734992
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Entry
115734992 CDS
T10595
Name
(RefSeq) LOW QUALITY PROTEIN: eukaryotic peptide chain release factor GTP-binding subunit ERF3A-like
KO
K03267
peptide chain release factor subunit 3
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115734992
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115734992
03012 Translation factors [BR:
rarg03012
]
115734992
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
115734992
Translation factors [BR:
rarg03012
]
Eukaryotic type
Release factors
115734992
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
EF-G_D2
MMR_HSR1
G-alpha
GTP_EFTU_D4
Motif
Other DBs
NCBI-GeneID:
115734992
NCBI-ProteinID:
XP_048138834
UniProt:
A0ABM3HQG7
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Position
7:complement(23701473..23709756)
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AA seq
489 aa
AA seq
DB search
MDIKEDIRGLQLHPAEENNGVVDPDDXKHEEMEMVDETEEGNDGEASAAEHVDAQEKRHL
NVVFIGHVDAGKSTTGGQILLLSGQVDDRTIQKYEKEAKDKSRESWYMAYIMDTNEEERA
KGKTVEVGRAHFETETTRFTILDAPGHRSYVPNMISGASQADIGVLVISARKGEFETGYE
KGGQTREHVQLAKTLGVSKLLVVVNKMDDPTVNWSKERYDEIESKMTPFLKSSGYNVKKD
VLFLPISGLVGSNIKTGVDKSLCSWWNGPCLFEALDAVEVPPRDPKGPFRMPIIDKFKEM
GTLVMGKVESGSIREGDSLVLMPNKAYAKVLAVHQDDDRVSCAGPGENVRVALFGIEDKD
ILSGFVLSSVEKPIAAVTEFVAQLQILELLDNAIFTAGYKAVLHIHAVVEECEIVELLQQ
IDPKAKKPLKKKVLFVKNGAVVVCRIHVNNLICIEKFSDFAQLGRFTLRTEGKTVAVGKV
TDLPVIARA
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atggatatcaaggaagacattcgtgggttgcaacttcacccagcagaagagaataatggg
gttgttgatcctgatgatncaaaacatgaagaaatggagatggttgatgaaacagaggaa
gggaatgatggtgaagcatctgctgctgaacatgttgatgcacaagagaagcgtcatttg
aatgttgtttttattggtcatgttgatgctggaaaatcaacgacaggtggccagattctc
cttcttagtggacaggttgatgatcgtacaatccaaaagtacgagaaagaagccaaggac
aagagtagagaaagctggtacatggcttacattatggacactaacgaagaagagagggct
aagggtaaaacagttgaggttgggagagcacattttgagactgaaacaactcgtttcacc
attttagatgcaccgggtcacagaagttatgtccctaatatgataagtggggcatcccag
gcagatataggcgtactggtaatatctgctagaaagggggaatttgagaccggatacgag
aaaggtggacaaacccgtgaacacgtccagctagctaaaaccttgggtgtatctaagctg
cttgttgttgtaaataaaatggatgatcccactgtaaattggtctaaagaaaggtatgat
gaaattgaatcgaagatgacaccttttctaaagtcttcaggctataacgtgaagaaagat
gttctatttctaccgatatctggtctggttggttcaaacataaaaactggagttgacaaa
agcttatgttcgtggtggaatgggccgtgcctctttgaagctctcgatgctgttgaggtt
cctccacgtgatcctaagggtcctttcaggatgcctatcattgacaaattcaaggaaatg
ggaactcttgtcatgggaaaagtggaatcaggcagcatacgtgaaggtgattctttagtt
ctcatgccaaataaggcctatgcgaaagtgcttgctgtgcaccaagatgatgatagggtt
agttgtgctggacctggtgaaaatgtccgggttgcactgtttgggattgaagacaaggac
atattgtctggatttgtcttgtcaagtgttgagaaaccaattgctgcagtcactgagttt
gttgcccagctgcagattcttgagctgctagacaatgcgatctttacagctggttataag
gctgttctacacatacatgcggttgttgaggaatgcgagattgttgagctgctacagcaa
atcgatccaaaggccaaaaagccattaaaaaagaaagttctatttgtgaagaatggggcc
gtggtcgtttgtcgcattcatgtgaacaacttgatatgtattgagaagttctctgatttc
gcacagcttgggaggttcactcttcgtactgaaggcaagacagtggctgtcgggaaggtc
accgatttacctgtgatagctagagcttga
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