Rhodamnia argentea (silver malletwood): 115735268
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Entry
115735268 CDS
T10595
Name
(RefSeq) protein CHROMATIN REMODELING 5
KO
K11367
chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rarg03021
]
115735268
03036 Chromosome and associated proteins [BR:
rarg03036
]
115735268
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
SAGA/TFTC/STAGA complex
115735268
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
SAGA complex
115735268
SLIK complex
115735268
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HTH_CHD1_Hrp3
Chromo
CHD1-like_C
HDA2-3
ResIII
DEAD
Chromo_MIT1
SWI2_SNF2
OAM_alpha
Motif
Other DBs
NCBI-GeneID:
115735268
NCBI-ProteinID:
XP_030522279
UniProt:
A0A8B8NJL5
LinkDB
All DBs
Position
8:complement(25461262..25483413)
Genome browser
AA seq
1750 aa
AA seq
DB search
MAFFKNFPNETVSRGIMEENSRAQSSIRNVDVDRSFSERIFDMNLDAQYPSDGEPSDSSR
VQKEAAADNGIRANNLQPSVKRTANAGKWGSTFWKDCQPMCPPERSDSGQDSKSGSGCKN
SGRSAGNSADARESDDDGQKEVTKGQRGPSDVPADEMLSDEYYEQDGEEQSESVVFGGFN
HSTRMNSMPSTKPKQFAANRNVSRNRRALNDDNEEDDDEKNDDADYEEEDDEDGDDPDDA
DFEPDSGVAGRQSANKDEDWDAEDSDEDNISDDDMDVMDEDDSFYSKKMKSKKGGKGGRS
GKSSTERKSLPAPRRPRKGKSPFEEDESSARDSDSESAEDFKGVTRRGGQLRKNNVRSNP
FTSIIKETNEVRTSTRSVRKVSYVESDDSEEVDEGKRKKSQKEEMEDEDGDSIEKVLWHQ
PTGTAEAASTNNRSTEPILMSHLFDFEPDWNEMEFLIKWKGQSHLHCQWKSLPDLQNLSG
FKKVLNYTKKVTEDVRYRRSISREEIEVNDVSKEMDLDLIKQYSQVERVIADRLSKDTTG
DVVPEYLVKWQGLSYAEATWEKDNDIGFAQDAIDEYKAREAVMADQGKSVDFQRRKSKAS
LRKLDEQPEWLKGGKLRDYQLEGLNFLVNSWRNDTNVILADEMGLGKTVQSVSMLGFLQN
AQQVYGPFLVVVPLSTLSNWAKEFRKWLPDMNVIVYVGTRASREVCQQYEFYNDKKGGRT
MKFNALLTTYEVVLKDKAVLSKIKWNYLMVDEAHRLKNSEAQLYTTLLEFSTKNKLLITG
TPLQNSVEELWALLHFLDPDKFKNKDDFVQNYKNLSSFNENELANLHMELRPHILRRVIK
DVEKSLPPKIERILRVEMSPLQKQYYKWILERNFHDLNKGVRGNQVSLLNIVVELKKCCN
HPFLFESADHGYGGDFRISDNSKLERIILSSGKLVILDKLLVRLHETKHRVLIFSQMVKM
LDILADYMSLRGFQFQRLDGSTKAELRQQAMDHFNAPGSDDFCFLLSTRAGGLGINLATA
DTVIIFDSDWNPQNDLQAMSRAHRIGQQEVVNIYRFVTSKSVEEDILERAKRKMVLDHLV
IQKLNAEGRLEKKETKKGSYFDKNELSAILRFGAEELFKEEKNDEESKKGLLSMDIDEIL
ERAEKVEEKEAVEEGHELLGAFKVANFCSAEDDSSFWSRWIKPEAVAQAEEALLPRAARN
IKSYAEVNHSDQPERTNKRRKKESEPQEKVSKRRKADYSAPSATVIEGAAVQVRGWSYGN
LSKRDALRFSRAVMKFGNENQINFIALEVGGSFAAAPPEAQIELFNSLIDGCRKAVEMGN
VDPKGPLLDFFGVSVKANDLLTRVQALQLLGKRISHYADPIKQFRVLTYLKPSNWSKGCG
WNQIDDARLLLGIYYHGFGNWEKIRLDGSLGLTKKIAPVELQHHETFLPRAPNLRDRATA
LLEMELAVGGKNSNVKGGRKASKNVKDNVLNTAQTRENRGAASAKVKLQVNKERPQKLAK
AEPLAKEEGEMSDDEEVCEQFKEVKWMEWCEDVMAEEIKTLNRLHRLQTTSANLPKEKVL
ARIRNYLQLIGQRIDGIVFEYEEVPYKQDRMTTRLWNYVSTFSNLSGEKLHQIYSKLRQE
QDEEVGPSHVNGSSSGSMGRDGESGYFPPFPNQRGYRNATSYHMPETAYKVHDPVKFEAW
KRRRRPEADAYSPVQPPIQQMANGSRLGDPNSLGILGAAPSDGRRFANERPYRMRQSSFP
QRPDFSSGIK
NT seq
5253 nt
NT seq
+upstream
nt +downstream
nt
atggccttcttcaagaattttccaaatgaaacagtatcacgtggcatcatggaagaaaat
agtcgggcacagagttccataaggaatgtggatgttgataggtctttcagcgagagaata
ttcgatatgaatctggatgcacagtaccccagtgacggtgaaccttctgattccagcaga
gtgcagaaagaagcagcagcagataatggaattagagcaaacaacctgcagccttctgta
aagagaacagctaatgctggcaaatggggttccacattttggaaggattgccaacccatg
tgtcctccagaaaggtctgattctggacaagattcgaaaagtgggtcaggctgtaaaaat
tctggaaggtcagcaggtaactcagctgacgcaagagagtcagatgacgatggacagaaa
gaagtaaccaagggtcaaagaggcccctctgatgttcccgcagatgagatgttgtctgat
gagtactatgagcaggatggggaagagcagagtgagtcagttgtttttggagggttcaat
cattccacaaggatgaattcgatgccctcaacaaagccaaaacaatttgcagctaataga
aatgtctctcggaatcgaagggccctaaatgatgacaatgaagaagatgatgatgaaaag
aatgacgacgctgactacgaggaagaggacgatgaggatggggatgaccctgatgatgct
gattttgagcctgattctggggttgctggccgccaatcagcaaacaaggacgaggactgg
gatgctgaagactctgatgaagacaatatatctgatgatgatatggatgtcatggatgaa
gatgactcattttattcaaagaaaatgaagagtaaaaaaggaggtaaaggtggacgcagt
ggcaaatcttccacagagcgcaagtcactccctgcaccaaggcgaccaagaaaaggtaaa
agtccattcgaggaagatgagtcttctgccagggattctgatagtgaaagtgcggaagat
ttcaagggcgttacaaggaggggtggacagctaaggaaaaacaatgtcaggtcaaatcct
tttacaagcatcataaaagaaaccaacgaggtccgtacctcaactaggtcagtaaggaag
gtatcatatgttgaaagcgatgatagtgaagaagttgatgaaggaaagaggaaaaaatcg
caaaaggaggaaatggaagacgaagatggtgactcaattgaaaaggttctctggcatcaa
ccaacgggcacagctgaagcggctagtacgaataacagatcaacagaacctattctcatg
agccatctgtttgattttgagccagattggaatgaaatggaatttttgataaagtggaaa
ggacagtcgcacttacactgtcaatggaagtctcttcctgatctacaaaatctcagtgga
tttaagaaggtgttgaattatactaaaaaggtgacagaggatgtgaggtataggaggtca
atctctcgggaggagattgaagtcaatgatgtgagcaaggaaatggacttagatctcatc
aagcaatatagtcaggtggaaagagtaattgccgacagacttagtaaagataccactgga
gatgttgtacctgagtatctagtcaaatggcaagggctatcttatgctgaagcaacctgg
gaaaaggacaacgatattgggtttgctcaagatgctattgatgagtacaaggcgcgggag
gctgttatggctgatcaaggcaagtcggtggacttccagcgcagaaagagcaaagcaagt
ttacgaaagcttgacgaacaaccagagtggttgaagggaggaaagcttcgtgactatcag
ttggaaggtttaaatttccttgttaacagttggaggaatgacacaaatgttattttagct
gatgaaatgggtcttggtaaaactgttcagtcagtttccatgcttggttttctgcagaat
gcacagcaagtctatgggccatttcttgtcgttgtaccactatctactttgtcgaattgg
gcgaaagaattcagaaagtggcttcctgatatgaacgtcattgtttacgttggtactcgt
gctagccgagaggtctgccagcagtatgagttctataatgataagaaaggtggtcgaacc
atgaagttcaatgccttattgaccacatatgaagttgtcctaaaggataaagctgttcta
tcaaagatcaagtggaattatcttatggttgatgaagcacataggttgaagaatagtgag
gcacaattgtacaccactcttttggagtttagcacaaaaaacaagttgcttattacgggt
acccccttacagaatagcgtggaagagctatgggctctgcttcactttcttgatcccgat
aaattcaagaataaagatgatttcgtccaaaactacaagaacctcagctcatttaatgaa
aatgagctggccaatcttcatatggaactgcgacctcacattctccggagagttatcaag
gatgtagagaagtctttgcctccaaagatcgagcgtatacttagagttgaaatgtcccct
ttgcagaaacagtactacaagtggatattagaaagaaatttccatgacttgaacaaagga
gttcgcgggaatcaggtctcccttttaaacattgttgtggagttgaagaaatgctgcaat
catcctttcctgtttgaaagtgcagaccatgggtatggaggggattttagaattagtgac
aacagtaaattggagaggatcattttgagtagtgggaagctggtcattcttgacaagttg
cttgtcagattgcatgagacaaagcatcgagttctgatcttctcccagatggttaaaatg
ttggatatactagcggattatatgtcgcttagagggttccaattccagcggcttgatggt
agtacaaaggccgagttgcgccagcaggctatggatcattttaatgctcctgggagtgat
gatttttgttttctcctatcaactcgggcaggtggccttggcattaatcttgctacagca
gatactgttataatatttgattctgactggaatccacaaaatgacttacaggcaatgagt
agagctcatcgaattgggcaacaagaggttgtcaacatttatagatttgttacaagcaaa
agtgtcgaggaagacatcttggagcgtgctaagagaaagatggttcttgaccatctggta
atccaaaaactgaatgccgagggtagattggagaagaaagaaacaaaaaaggggagctat
tttgacaaaaacgagttgtctgctatcttgagatttggggcagaggaacttttcaaggag
gaaaaaaatgatgaagagagcaagaaaggactactaagcatggatattgatgaaattctt
gaaagagctgaaaaagtggaagagaaggaagctgtggaggaggggcatgaattgctgggt
gctttcaaggttgcgaatttctgtagtgctgaagatgatagtagtttttggagtcgatgg
atcaaaccagaagctgtagctcaagctgaagaagctttacttcctcgtgctgcaaggaac
atcaagagctatgcagaggttaatcactcagaccaacctgagagaaccaataaaaggagg
aaaaaggaatctgaaccacaagagaaggtctctaaacgccgcaaagctgattactctgcc
ccctctgctacagttattgagggtgcagctgttcaagtaagaggatggtcttatggcaat
ctgtctaagagagatgcattgcgcttttctcgtgcggttatgaaatttgggaatgagaat
caaatcaattttattgctttggaagttggtggatcatttgctgcagctcctcctgaagcg
cagattgagcttttcaactctttgattgatggctgtagaaaggcagtcgaaatgggaaac
gttgatccgaaggggccacttttagatttttttggtgtctctgtgaaagctaacgatctt
cttactcgagttcaagcacttcagctcctaggaaagcgcatcagtcactatgctgatcca
atcaagcagttcagggtgttgacttacctcaaaccttcgaattggtccaaaggctgtgga
tggaatcagattgacgatgcaagattgctgcttggcatttattatcatggatttggcaat
tgggaaaagattcggttagatggaagtcttggccttacaaagaagattgctccagttgaa
cttcagcaccatgagacatttctaccgcgtgctccaaatttgagagaccgggcaactgct
cttctggaaatggaacttgctgttggaggcaagaattctaatgtcaaaggaggacgtaaa
gcttctaagaatgtcaaagataatgttctcaacacagctcaaacaagggagaacagaggt
gctgcttctgcaaaagttaagttgcaagtgaacaaggaaaggcctcagaaattggccaaa
gctgaaccattagctaaagaggaaggtgaaatgtccgatgatgaagaagtgtgtgagcaa
tttaaggaagtaaaatggatggaatggtgtgaagatgtcatggcggaagagataaaaacc
ttgaatcgtcttcatagattacagactaccagtgccaatcttccgaaggaaaaggtgctc
gcaaggattcgaaattatctccagctcattggacaacggattgatggaatcgtttttgaa
tatgaggaagtgccttacaagcaagacaggatgaccacgcgactatggaattatgtctct
accttctcaaatttatctggggagaaacttcatcagatttactcaaaacttaggcaggag
caggacgaggaggttgggccttctcatgttaatggctcttcatccggctcaatgggcaga
gatggcgagtctggctatttccctcctttccccaaccaaagaggctacagaaatgcgact
tcttaccatatgcctgagacggcatacaaagtccatgatccagttaaattcgaagcctgg
aaacggaggaggagacccgaagcagatgcatattcccctgttcagcctccaatacagcaa
atggcgaatggttctcgtttaggcgacccgaattcgttgggtatcctcggagcggcgcca
tctgatggtagacgatttgctaacgagagaccatacaggatgcgtcagtccagctttccc
cagagaccagatttttcttcggggatcaaataa
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integrated database retrieval system
