Rhodamnia argentea (silver malletwood): 115735321
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Entry
115735321 CDS
T10595
Name
(RefSeq) histone deacetylase 9 isoform X1
KO
K06067
histone deacetylase 1/2 [EC:
3.5.1.98
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03082
ATP-dependent chromatin remodeling
rarg03083
Polycomb repressive complex
Brite
Enzymes [BR:
rarg01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
115735321
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class I HDACs
115735321
HDAC complexes
Sin3A-HDAC complex
115735321
BRAF-HDAC complex
115735321
REST complex
115735321
SHIP complex
115735321
MiDAC complex
115735321
Polycomb repressive complex (PRC) and associated proteins
Noncanonical PRC1 (PRC1.6)
115735321
Heterochromatin formation proteins
Other heterochromatin formation proteins
115735321
Chromatin remodeling factors
NuRD complex
115735321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115735321
NCBI-ProteinID:
XP_030522378
UniProt:
A0A8B8NJY0
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Position
8:23747740..23753471
Genome browser
AA seq
432 aa
AA seq
DB search
MRPKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHNKMEVYRPHKAYPVEL
AQFHSPDYVEFLHRITPDTQHLFSNELAKYNLGEDCPVFENLFEFCQIYAGGTIDAARRL
NNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKYHARVLYIDIDVHHGDGVE
EAFYFTDRVMTVSFHKFGDMFFPGTGDVKEIGGKEGKFYAINVPLKDGIDDTSFTRLFKA
IIAKVVETYQPGAIVLQCGADSLAGDRLGCFNLSIDGHSECVRFVKKFNLPLLVTGGGGY
TKENVARCWAVETGVLLDTELPNEIPENEYIKYFAPDYSLKIPRGNIILENLNSKSYLSA
IKMQVFENLRNIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERMDQHTQDKQIQRDDEYYD
GDNDNDQNMDDA
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgcgacccaaggacaggatttcttacttctacgacggagatgtgggcagcgtctatttt
ggtcccaatcatccgatgaagccgcaccggctctgcatgactcaccatcttgtcctctct
tatgagcttcacaataagatggaagtttatcggccgcacaaagcctaccccgttgagctc
gcccagttccattcccctgattatgtcgagtttttgcaccggattacgcctgacacccag
cacttgttctcaaatgaattggcaaaatataatcttggagaagattgtcctgtctttgaa
aacttgttcgagttttgtcagatttatgctggtggcacgatagatgctgcaaggagatta
aataatcaactctgtgatatagctattaactgggctggaggattacatcatgccaagaag
tgtgaagcatctggattctgctatataaatgacctagttttgggaatattggagctgctg
aaatatcatgcacgtgttttatacattgacatagatgtgcatcatggtgatggcgtagaa
gaagccttttacttcactgatagggtaatgaccgttagttttcacaaatttggggatatg
ttttttcctggaactggtgatgttaaggaaataggaggcaaagaaggaaagttttatgct
attaatgtcccactcaaggatggaatagacgatactagcttcactcgacttttcaaggct
atcattgcgaaggtcgtcgaaacataccaacctggtgctattgtactccaatgcggggca
gattcacttgctggggaccggttggggtgttttaatctctctattgatggacattctgag
tgtgttaggtttgtcaagaaattcaatttgcccttgttggttactggtggtggaggatac
acaaaagagaatgttgctcgatgttgggcggttgaaaccggagttctcttagatacagag
cttccaaatgagattcctgaaaacgagtatatcaagtactttgctcctgattattcgttg
aagattcctcgtggaaatataatactcgagaatctaaatagcaagtcctatcttagtgca
atcaaaatgcaagtgttcgaaaaccttcgtaatatccaacatgccccgagtgtacaaatg
caggaggttccacctgatttctatattcccgattttgatgaagacgagcaaaatcccgat
gaacgaatggaccagcatacccaggacaagcaaatccaacgagatgatgaatattatgat
ggcgacaatgataatgaccaaaacatggatgatgcatga
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