Rhodamnia argentea (silver malletwood): 115735334
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Entry
115735334 CDS
T10595
Name
(RefSeq) structural maintenance of chromosomes protein 3
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rarg03036
]
115735334
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
rarg00535
]
115735334
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
115735334
Meiosis-specific proteins
Cohesin complex and associated proteins
115735334
Proteoglycans [BR:
rarg00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
115735334
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
Motif
Other DBs
NCBI-GeneID:
115735334
NCBI-ProteinID:
XP_030522397
UniProt:
A0A8B8NIT3
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Position
8:24762986..24778595
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AA seq
1204 aa
AA seq
DB search
MYIKQVIIEGFKSYREQVATSTFSPKVNCVVGANGSGKSNFFHAIRFVLSDIFQNLRSED
RHALLHEGAGHQVLSAFVEIVFDNSDNRIPVDKEEVRLRRTVGLKKDEYYLDGKHITKTE
VMNILESAGFSRSNPYYVVQQGKIASLTLMKDSERLDLLKEIGGTRVYEERRRESKKIMQ
ETGNKRKQIIQVVQYLDERLKELDEEKEELRKYQQLDKQRKSLEYTIYDKELQDARQKLA
EIEEARSKVSDTSIKSYNSSLDAREKSRELDEKLKELIKAVSGLSKEREAAEQRRTEAVK
KQTELELDVKDLQEKISGIIRAKEEAAKQLEILQKEIQDSTEELNNIIPQYDKQVVEEQE
ITKGIMEREKQLSILYQKQGRATQFSSKAARDKWLQKEIDELERVLSNNSTQEQKLQKEI
DQLKTESSEQDVYIENRKTEITKLESLISNTIGRLRDYKAQRNKLQDERKSLWDKESELS
TQIDKWKAEVDKAEKNLDHATPGDVRRGLNSVRKICREYQMSGVYGPIIELLDCDEKFYT
AVEVTAGNSLFHVVVENDEISTRIIRHLNSLKGGRVTFIPLNRVKPPNVNYPQSSDVIPL
LKKLKFLPNYTPAFGQVFARTVICRDLDVATRVARNDGLDCITLEGDQVSKKGGMTGGFY
DYRRSRLKFMNIIRQNTKSINMKEEELKNIKEELQKKDQEITELVSEQQKIDAELAHVKS
ELEQLKLDISNAKKQKMLNTKATENKMKSLVDVRTQIDQLKASMAMKRAEMGTDLIDHLT
REEKETLSNLNREIRELKKQLVTCKTERIETETRKAELETNLATNLKRRKQEFETIISSS
ETDLHENEAESKWQELKDAESLVIDATQRLEGINRSIEETNKQIKKIKDEMAKLKALEDN
YEKTLQDETKELEQLFSRRNALIAKQDEYSKKIRNLGPLSSDAFETYKRRSIKELQKMLH
RCNEQLQQFSHVNKKALDQYVNFTEQREELEKRQRELDAGDEKIGELISVLDQRKDESIE
RTFKGVARHFREVFSELVQGGHGHLVMMKKKDGDLADDDQDEDGPREADLEGRVEKYIGV
KVKVSFTGQGETQSMKQLSGGQKTVVALALIFAIQRCDPAPFYLFDEIDAALDPQYRTAV
GNMIRRLADTSSTQFITTTFRPELVKVADQIYGVTHKNRVSRVNLVSKDDALDFIEHDQS
HNAE
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atgtacatcaagcaggttatcatcgaagggttcaagagctacagagaacaagttgctaca
tcaactttcagtccaaaagttaactgtgttgttggtgctaatggatctggcaaatcaaac
ttttttcatgcaataagattcgtgttaagcgatatttttcagaacctgcgcagtgaagat
agacatgcccttctccatgaaggtgcagggcaccaagttttatccgcttttgtggagatt
gtctttgataattctgacaaccgcattccggttgataaggaggaagtgcgcttgcgcaga
actgttggtttgaagaaggatgagtattatttggatggaaagcacatcacgaaaactgaa
gttatgaatatactggaaagtgctgggttttctcgctctaatccttactatgtggtgcaa
caaggaaagatagcgtcactgactttgatgaaagactctgagcggctggacttgttgaaa
gagattggtggtactagagtttatgaggagagacgtcgtgagagtaagaaaatcatgcag
gaaactggtaataagaggaagcagattatccaagttgttcagtatttggatgagagactg
aaggaactggatgaggagaaagaggaattgcgaaaatatcaacagcttgacaagcagcgt
aaatccttggaatacacaatttatgataaggagcttcaagatgctaggcaaaagttagcc
gagatagaggaggctcggtcgaaggtatctgacacgtcaattaaaagttacaacagctct
ctcgatgctcgtgagaagtccagagagttggacgaaaaattgaaagaactaattaaagca
gttagtggcctaagtaaggaaagagaagcagcagaacagcgaagaacagaagctgtgaaa
aagcagacagagcttgagcttgatgtcaaggacttgcaagaaaaaatttcagggataatc
agagccaaggaggaagcagcgaaacagcttgagattttacagaaagaaattcaggactca
accgaggagctcaataatattattcctcagtacgacaagcaagttgttgaagaacaggag
ataactaaaggaattatggagcgggagaaacagcttagcattctatatcagaagcaaggt
cgggccacccaattttcaagtaaagctgctcgggataaatggcttcaaaaggaaattgat
gaacttgaacgagttctttctaataattcaactcaggagcaaaagcttcaaaaggaaatt
gatcagcttaaaaccgagtcaagtgagcaagatgtgtacattgagaaccgtaaaactgag
attacgaagttggaatccctcatttcaaacacaattggaaggctaagagattataaggca
cagaggaataagctacaggatgagcggaaatccttgtgggacaaggaaagtgaactttca
actcaaatcgataagtggaaagctgaggtcgataaggcagagaagaaccttgatcatgca
acacctggtgatgtgaggagagggcttaattctgtcagaaaaatctgccgagagtaccag
atgtctggggtttatggtcccatcattgagttgcttgattgtgatgagaagttctatacc
gcagtggaagttactgcaggaaacagtttatttcatgtggtggttgagaacgatgagatt
tcaactcggattattagacaccttaactcactgaaaggcggacgagtcactttcatacct
ctgaacagggtcaagcccccaaatgtaaattatccacagagttcagatgtgatacctcta
ttaaagaaactgaaattcttaccaaattacactcccgcatttggccaggtttttgctagg
acagtgatttgccgagatttggatgtggctacaagggtagctcgcaatgacggtctggat
tgtataactttggaaggtgatcaagttagcaagaaaggtggtatgacagggggattctac
gactataggcgctcaaggttgaagtttatgaatataatcaggcaaaatacaaaatcgatc
aacatgaaggaagaggaactgaagaatattaaggaggaactgcaaaagaaagaccaggaa
ataactgaacttgtctctgagcagcaaaaaattgatgctgagctggcgcatgttaaatca
gagttggaacagcttaagctagatatctccaacgctaaaaagcagaaaatgttaaatacg
aaagctactgaaaacaagatgaaatcacttgtggatgtcagaactcagatcgatcagctc
aaagccagcatggcgatgaagcgagctgaaatgggcacggatttaattgatcatctaacg
cgtgaggagaaagaaacactgtcaaatctgaatcgtgaaataagagaactaaagaagcag
cttgttacctgcaaaacagagcgcattgagacggaaacaagaaaagccgagcttgagact
aaccttgcaactaacctcaagaggcggaagcaagagtttgagactattatatcctcatca
gagactgatttgcatgaaaatgaagctgaatcaaagtggcaagagctaaaagatgctgaa
tcattggtcattgatgcaacccagcgattagaaggaattaatagaagtatagaggaaaca
aataaacaaatcaaaaagatcaaagatgagatggcgaagttgaaggctttggaggacaac
tacgagaaaacacttcaggatgaaactaaagagcttgaacaactttttagccgaaggaat
gcccttatagctaaacaggacgagtactcaaagaaaataaggaacttgggcccattatct
tctgatgcttttgagacgtataaacggaggagcatcaaagaattgcagaagatgcttcac
agatgcaacgagcagctccaacagttcagtcatgtaaacaagaaagcacttgatcagtac
gtgaacttcacagagcaaagggaggagctggagaaaaggcagagggaactagatgctggt
gacgagaaaattggtgaactaatatcagttttagatcagaggaaggatgagtcaattgaa
cgtacgttcaaaggtgttgcaaggcattttcgagaagtattctctgaactggtacaaggc
ggtcatggacatctggttatgatgaagaaaaaggatggggatcttgctgatgatgatcaa
gatgaggatggacctcgcgaagcagatttagagggaagggtagagaaatacatcggtgtt
aaagtcaaggtttcttttactgggcaaggggagacacaatcgatgaagcagttgtctgga
ggtcaaaaaactgttgttgcccttgctttaatctttgctatacaaagatgcgatcctgct
cccttttatctcttcgatgagatagacgcagcactggatcctcagtacagaacagcagtc
gggaatatgattcggcgcctggcagacacatcaagcacccagttcataaccaccaccttc
cggcctgaacttgtgaaggttgcggaccagatatatggtgtgacacacaaaaatcgagta
agccgtgtcaatcttgtttccaaggatgacgcgttggactttatcgagcatgaccagtca
cacaatgcggagtga
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integrated database retrieval system
