KEGG   Rhodamnia argentea (silver malletwood): 115735468
Entry
115735468         CDS       T10595                                 
Name
(RefSeq) DNA ligase 1
  KO
K10747  DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7]
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03030  DNA replication
rarg03410  Base excision repair
rarg03420  Nucleotide excision repair
rarg03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115735468
   03410 Base excision repair
    115735468
   03420 Nucleotide excision repair
    115735468
   03430 Mismatch repair
    115735468
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:rarg03032]
    115735468
   03400 DNA repair and recombination proteins [BR:rarg03400]
    115735468
Enzymes [BR:rarg01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     115735468
    6.5.1.6  DNA ligase (ATP or NAD+)
     115735468
    6.5.1.7  DNA ligase (ATP, ADP or GTP)
     115735468
DNA replication proteins [BR:rarg03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    115735468
 Prokaryotic type
   Elongation factors (archaeal)
    Other elongation factors
     115735468
DNA repair and recombination proteins [BR:rarg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     115735468
   NER (nucleotide excision repair)
    Other NER factors
     115735468
   MMR (mismatch excision repair)
    Other MMR factors
     115735468
SSDB
Motif
Pfam: DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C
Other DBs
NCBI-GeneID: 115735468
NCBI-ProteinID: XP_030522574
UniProt: A0A8B8NKD5
LinkDB
Position
8:complement(23109331..23119559)
AA seq 803 aa
MFFLRSCHYSPRLALNLTLVSPLARSLFSAKPSSLRRISLSSSRPPNRRMSAKPSAFDAL
MSGARAAAAAKKKPRPPSPKKRKSPDPAPVENPNDDAKPDSASLEAKVDQSEAIAGGNRL
IEVKGSNAEKSPEQKKAKHSEGNEKNAKKGDSSAERVKELKSKIHLLKKKPADFSPKSVA
CWSEGERVPFIFLCLAFDLISNETGRIVITDIVCNALRTVMNTTPGDLVAVVYLLANRIA
PAHEGLELGIGDASIIKALAEACGRTEVQIKKQYKELGDLGLVAKASRSSQSTMRKPDAL
TLAKVFDMFRLIAKESGQNSQEKKKNHIKALLVAATDCEPQYLIRLLQTKLRIGLAEQTL
LAALGQAAVYAEKHSKPSTDVQSPLEEAAKTVKQVYSVLPVYDRIVPALLTDGVWNLPKS
CTFTLGVPVGPMLAKPTKGVSEILSKFQNMVYTCEYKYDGERAQIHYKEDGSVEIYSRNA
EHNTGKFPDVVATVSRLKKEAVKSFVLDCELVAYDQEKKKILPFQILSTRARKNVVLSEI
KVDVCIYAFDMLYLNGKPLIQEELKLRREHLYDSFKEEPGFFQFATAITSNDIEEIQTFL
DAAVNASCEGLIIKTLDRDATYEPSKRSNNWLKLKKDYMDSIGDSVDLVPIAAFHGRGKR
TGVYGAFLLACYDGSNEEFQSICKIGTGFSEAMLEERSASLRSKVIPKPKSYYRYSDTIS
PDVWFEPSEVWEVKAADLTISPVHRAAVGTVDPDKGISLRFPRLVRVREDKAPEQASPSD
LIAEMYFAQKHNHPNNKDEDEDD
NT seq 2412 nt   +upstreamnt  +downstreamnt
atgttcttccttcgctcatgccactactctccacgcctcgctctcaatctcacgctcgtc
tcgcctctcgctcggtctctcttctccgctaaaccctcctccctccgccgcatctcgctc
tcctcgtcgcggccgccgaaccgtaggatgtccgcgaagccctccgcattcgacgcgctc
atgtccggcgcccgcgccgccgccgccgccaagaagaagccccggcctccctcgccgaag
aagcgcaaatcccccgatcccgcgccagtcgaaaaccctaatgacgacgcgaagcccgat
tcggcttcactggaagctaaggtcgaccaatcggaggcaatcgcaggagggaaccggcta
attgaagtcaaaggctcgaatgcggagaaatcccccgagcagaaaaaggcgaagcatagc
gagggaaacgagaagaatgcgaagaaaggggactcgtctgctgagagagtgaaggaattg
aagagcaaaatccatctgttgaagaagaaaccggccgatttctctccaaagtctgtggct
tgctggagcgagggcgagagagttccgttcatatttttgtgcttggcgttcgacctcata
tcgaatgagactgggaggattgtgattacagacatagtgtgtaatgcgttgaggactgtc
atgaacaccacgccgggtgatttggttgctgttgtgtacctattggccaacaggattgct
cctgctcacgaggggctggagctgggaatcggggatgcgtcaatcattaaggcccttgct
gaggcctgtggaaggacagaagtgcagattaagaagcaatacaaggaattgggagatttg
ggccttgtcgctaaagcaagtcgatcatctcaatccacaatgcgcaagcctgatgcatta
actcttgccaaagtctttgatatgtttcggctcatagctaaggaatctgggcagaatagt
caggaaaagaaaaagaaccatataaaagctcttcttgttgcagccactgattgtgaacct
caatatttgatccgcctacttcagacaaaattgaggattggattagcagagcagactctc
ttagctgcacttggacaagctgctgtatatgctgaaaaacactctaaaccatccacagat
gttcaatctcctctagaagaggcagcaaagactgtcaagcaagtgtactctgttcttcca
gtttatgatagaatagttcctgctcttctgactgatggtgtatggaatcttccaaagtcg
tgtacttttactttgggggtccctgttggacctatgcttgcaaaaccaacaaaaggtgtc
tcggagattttaagtaaattccagaacatggtatacacttgtgaatacaagtatgatggg
gagcgtgcacagatacattataaggaggatggttctgtcgagatatacagtagaaatgct
gaacataacactggcaaatttcctgatgttgttgccacggtatcaagattaaagaaggaa
gctgttaaatcatttgttctagattgtgaacttgtcgcttatgatcaagaaaagaaaaag
attcttcctttccagatcctcagtacacgagctcgcaaaaatgtagtcttgagcgagatc
aaggtggatgtctgcatatatgcttttgacatgctatatttaaatggcaagccacttatt
caggaagaactcaaacttcggagggagcatctatacgattcattcaaggaggaacctgga
ttttttcagtttgccactgcaataacatctaatgatatagaagagatacaaacgtttctt
gacgctgctgttaatgcaagttgtgaaggtttgattatcaaaacactggatcgagatgct
acatatgagccttcaaaaaggtcaaataactggctgaaattgaagaaagattatatggac
agtattggcgattcagtagatttggtgcctatagccgctttccatggtcgtgggaagcgt
acaggtgtctatggtgcgtttctccttgcttgttatgacggctccaatgaagagtttcaa
agcatttgtaaaattggaactggcttttctgaagccatgcttgaagaacgatctgccagt
cttcggtctaaggtcattccgaagccaaagtcatattatcgttattctgatacaatcagt
ccagatgtgtggtttgaaccctctgaggtttgggaggtgaaagctgcagacttaactatt
agccctgttcatcgtgctgcggttggaacagtagatcctgataagggaatctctctccgg
tttcctcgtttagttcgtgtccgtgaagataaagcaccggagcaagcaagcccatcggat
ctgattgcggagatgtattttgctcagaagcacaatcacccaaataataaagatgaggat
gaagatgactga

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