Rhodamnia argentea (silver malletwood): 115735940
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Entry
115735940 CDS
T10595
Name
(RefSeq) WD-40 repeat-containing protein MSI2
KO
K10752
histone-binding protein RBBP4
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03082
ATP-dependent chromatin remodeling
rarg03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115735940
03083 Polycomb repressive complex
115735940
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rarg03036
]
115735940
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
115735940
Histone modification proteins
HAT complexes
HATB complex
115735940
HDAC complexes
Sin3A-HDAC complex
115735940
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
115735940
PRC2.2
115735940
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
115735940
Heterochromatin formation proteins
Other heterochromatin formation proteins
115735940
Chromatin remodeling factors
NuRD complex
115735940
NuRF complex
115735940
NuRF complex (fruit fly)
115735940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_CDC20-Fz
CAF1C_H4-bd
WD40_Prp19
Beta-prop_TEP1_2nd
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_CAF1B_HIR1
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_HPS5
WD40_MABP1-WDR62_2nd
Beta-prop_WDR19_1st
WD40_RFWD3
WD_LRWD1
Beta-prop_EML
Beta-prop_NUP159_NUP214
Beta-prop_WDR90_POC16_2nd
MIOS_WD40
Beta-prop_DCAF4
Beta-prop_SPT8
WD40_MABP1-WDR62_1st
Motif
Other DBs
NCBI-GeneID:
115735940
NCBI-ProteinID:
XP_030523263
UniProt:
A0A8B8NMQ3
LinkDB
All DBs
Position
11:complement(21622436..21625138)
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AA seq
402 aa
AA seq
DB search
MAEEESAELEQLEEEFKVWKKNTPILYDLVISHALEWPSLTVHWAPLPPQPFADDHSLAV
HRLVLGTHTSDGVPNFLLLADALLPSKSDRSSENAALPKVEISQKIRVDGEVNRARFMPQ
NHNIVGAKTNGCEVYVFDCSKQAAKQQEGGFDPDLRLMGHDGEGYGLSWSPLKEGYLLSA
SHDKKICLWNISAEAQGKVLSAMHVFEAHENAVGDVSWHLKNDNLFGSVGDDCQLMIWDL
RTNKPQQCVKAHEKEVNSVSFNSYNDWILATASSDTTVGLFDTRKLTTPLHVFSSHEGEV
LQVEWDPNHEAVLASSSEDRRVMVWDLNRIGDEQQEGDASDGPAELLFSHGGHKAKISDF
SWNKNEPWVISSVAEDNSVQVWQMAESICGDDDGMQAMDGYV
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcggaagaggaaagcgccgagctcgaacagctcgaggaagagttcaaggtgtggaag
aagaacaccccgatcctctatgacctcgtgatctcccacgccctcgagtggccatccctt
accgtccactgggctccgctccctccccagcccttcgccgacgaccattccctcgccgtc
caccgcctcgtcctcggcacccacacctccgacggcgtccccaacttcctcttgctcgct
gacgccctcctcccttccaaatctgatcgttccagtgagaacgccgcgcttcccaaggtg
gagatatcgcaaaagattcgcgtggatggggaagtgaatagagcacggttcatgccacaa
aatcacaatattgtgggtgctaagacaaatggttgtgaggtttatgtttttgattgttct
aagcaggctgcgaagcagcaggagggtgggtttgatccggatttgaggttgatgggtcat
gatggagaaggctatggattgtcttggagccccttgaaagaaggttaccttttaagcgct
tcccatgataaaaagatttgtctctggaatatatctgccgaggcacagggtaaagtgctc
agtgcaatgcatgttttcgaggctcatgagaatgcggttggagatgtgtcttggcacttg
aagaatgacaacttatttgggtctgtcggtgatgattgtcaattgatgatctgggacttg
cgaacgaataaaccacagcaatgtgttaaagcacatgagaaagaggtgaattctgtatct
ttcaactcgtataatgactggattctggcaaccgcgtcttcagacacaacagttggactg
tttgacacgcggaagctgaccacgccattgcatgtctttagcagccatgaaggagaggtc
ttgcaagtagaatgggatcctaatcatgaggctgtgttagcttcttcctcggaggacaga
agggtgatggtctgggatctgaacagaattggagatgaacagcaagagggagatgcaagc
gatggccctgccgaactgctattttctcatgggggtcataaagctaagatctcagatttc
tcatggaacaagaacgaaccatgggttatctcgagtgtggctgaagacaactctgttcag
gtttggcaaatggctgagagtatctgtggagatgatgatggcatgcaggccatggatgga
tatgtatga
DBGET
integrated database retrieval system
