Rhodamnia argentea (silver malletwood): 115735946
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Entry
115735946 CDS
T10595
Name
(RefSeq) SWI/SNF complex subunit SWI3D isoform X1
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03082
ATP-dependent chromatin remodeling
Brite
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115735946
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115735946
PBAF complex
115735946
GBAF(ncBAF) complex
115735946
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115735946
NCBI-ProteinID:
XP_030523277
UniProt:
A0A8B8NLA9
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Position
11:20579824..20586623
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AA seq
977 aa
AA seq
DB search
MEEKRRDAGTLPAGVATSEPQSADSASTRRRAGAQKRKASALNASGSSSAPSKRVTREKS
SISHAQIHNGPLTRARQGPGGLASASLAALKSEEKKAAQEVLEAEEARRASEQWEALEAA
IEADFEAVRSRNADVHVVPNHCGWFSWTKVHPLEERALASFFNGKSQSRTHGMYLEIRNK
IMKKFRANPKSLIELKDLEDLEVGDLEARQEVFEFLDYWGLINFHPFLPSDSLKTDADVI
GIAKEDPLVEKLYRFEATQPCLPIAPRNNQAAPPMPSGLFSESAIAEDLVKPEGPSVEYH
CNSCSADCSRKRYHCQKQADFDLCTDCFNSGKFGSGMSSSDFILMEPAELHGVIGGNWTD
QETLLLLEALELYKENWSEIAEHVATKSKAQCILHFLQMPIQDAFLDCDDDVDATSKENT
DLTTTNDDVPISRDTPERTEGKTDPVEDQPQTSPMDISKAEDTHEGTVDEKTSTQEEANK
SKVAQDIPQLEDTEVEVKDIQENLALKALREAFEALGYSSTPESSLSFAEVGNPVMALAG
FLARLVGSDVAAASAHRSLKSVSGSSPGLQLVMRHCFILEEPPDHEELAGSQRLVKETGD
VAPENDTHKEQKEDMILSITSEEGLNNGEKCENNDHPAAEDNVEAAKELDSTVQQVKHSD
LNVDSSDLPKNSESGVMKDSNDLASDKELPPSSAPSQENDKCGDPSHSPNVDLVNDSVPS
EMAAQPESSSAGVTSSSQEVSRSNDVGHEHPISNDDGRPVTSNEIEQLDKSAATESSLPK
DKTKDLSDSETTGTKQSHSVVEIGSTTEDLLKDGKKGDHEHAATKYDSMDKLKRAAASAL
SAAAVKAKLLADREVDQIRHLAILLAEKQLHKVEMKLAFYNEVENVTMRVREQLERARQR
LYHERAQIIAARLGYSGSSSRPNPASLPTSRIPMNMVNLAPRAPTSMPSQRPPLLRPSGN
VAPNSSNPFVSTSTAGG
NT seq
2934 nt
NT seq
+upstream
nt +downstream
nt
atggaagagaaacgccgcgacgccggaaccctaccggcgggggtcgccacctccgagcct
cagtcggcggattccgcctcgacgcgccgccgagcgggagctcagaagagaaaagccagc
gccctcaacgcctcgggctcttcatccgcgccgtccaagcgagtcactcgcgagaagagc
tccatttcccacgcccagatccacaacggaccactgaccagagctcgccagggccccggt
ggtctcgcctccgcttccctggctgccttgaaaagcgaggagaagaaggcggcacaggag
gttttggaggctgaggaggcgagaagggcgagcgaacagtgggaggctctggaggcggcc
atcgaagctgattttgaggcggttagatctcgaaatgctgatgttcacgtagttcctaac
cattgtggttggttttcatggacaaaagttcatcctcttgaggagcgtgcgttagcttcc
tttttcaatgggaaatctcaaagtcgaacacatggtatgtacttggagatacgcaataaa
attatgaagaagttccgtgccaacccaaaatcgttgattgaactgaaggacctggaagat
cttgaagtgggagacttggaagctaggcaggaagtttttgagtttctggattactggggt
ttgattaatttccatcccttcctaccatctgactcattgaagactgatgctgatgtcatt
ggaattgcaaaggaggatcctttggtagaaaaattataccgctttgaggcaacacaacca
tgtcttcctatcgccccgagaaacaaccaagctgctccacctatgccatccgggttattt
tcagaatctgcaattgctgaagatttagtaaaaccagaagggccatctgtggagtaccac
tgcaattcttgttccgctgattgctctcggaagcgttaccactgtcaaaagcaggcagac
tttgatttatgcactgactgctttaatagtggtaagtttgggtcaggcatgtcttcgtca
gacttcattcttatggaacctgctgagttacatggtgtaattggtggaaattggactgat
caggagacactgcttctcctggaagcattggaactttacaaagaaaactggagcgagatt
gctgagcatgtagcaacaaaatcaaaagctcagtgcatattgcactttcttcaaatgcca
attcaggatgcttttcttgattgtgatgatgatgttgatgcgacttctaaggaaaataca
gatcttactacgacaaatgatgatgtacctattagtagagataccccagaaaggactgaa
ggtaagactgatccggttgaggatcagccccagacttcacctatggatatatccaaagca
gaagatactcatgaagggacagttgatgagaaaacttcaactcaagaagaagctaataaa
tcaaaggttgctcaggatattccacagcttgaagacacagaagtggaagttaaggacata
caggaaaatcttgctttgaaggctcttagagaagcgtttgaagcacttggatattcttca
acccctgaaagttctctttcatttgctgaagtgggaaatcctgtcatggccctggctgga
ttcctggcacgattggtaggatctgatgttgcagctgcctctgcacatagatctctaaaa
tcagtttctggcagttctcctggcttgcaattggttatgagacactgcttcattttggaa
gagccaccagatcatgaggagctggcaggttctcagagacttgtaaaagaaacgggcgat
gtcgctcctgagaatgatacacataaggagcagaaagaggatatgatcctttcaatcacc
agtgaggagggtctaaataatggtgagaaatgtgaaaacaatgatcatcctgctgcagaa
gataatgtagaagctgcaaaagagctagattctacagtgcagcaagtcaaacatagtgac
cttaatgtggactcctctgatctgccgaagaactctgaatcaggtgtcatgaaggattca
aatgacttggcatcagataaagagcttccgcccagttctgcaccatcacaagagaatgat
aaatgtggagatccttctcattctccaaatgtggacttggttaacgattccgtaccttca
gagatggctgcgcagccagaatctagttcagctggagtaacttcatcatctcaagaggta
tctaggagtaatgacgtgggacatgaacatccgataagtaatgatgatgggcgccctgtt
acatcaaatgagattgagcagctggataaatctgcagccactgagtcatcccttcctaag
gataaaacaaaggatctttctgattctgagaccactggaactaagcagtcacattctgtg
gtggaaattggatcaacaactgaggatctacttaaagacggtaaaaaaggggaccatgag
catgcagcaacaaaatatgactctatggacaaactaaaacgtgctgcagcttctgctctt
tcagcagctgcagtgaaggcaaaacttctcgcagaccgcgaggtagatcaaatccgacac
cttgctatattattggcagaaaagcagttgcataaagtggagatgaagctggcgttttac
aatgaagtagagaacgtgacgatgagagtgagagaacaattggagagggcaagacagagg
ttgtaccacgagagagcgcagataattgcagctcggctaggttattcaggttcctcatct
agaccaaacccggcgtcgctgcctaccagtagaattcccatgaatatggtaaacctggct
ccaagggccccaacaagcatgccttcccaaagaccgcctcttctgagaccgtcgggaaac
gtggctcccaactcttctaacccatttgtatccacatcaactgcaggaggttga
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