KEGG   Rhodamnia argentea (silver malletwood): 115736183
Entry
115736183         CDS       T10595                                 
Name
(RefSeq) polyubiquitin isoform X1
  KO
K03873  elongin-B
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    115736183
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:rarg04121]
    115736183
   03400 DNA repair and recombination proteins [BR:rarg03400]
    115736183
Ubiquitin system [BR:rarg04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   Cul2 complex
    Adoptor protein
     115736183
   Cul5 complex
     115736183
DNA repair and recombination proteins [BR:rarg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     115736183
SSDB
Motif
Pfam: ubiquitin Rad60-SLD Dsc3_N UBL_UBAC1 Ubiquitin_2 UN_NPL4
Other DBs
NCBI-GeneID: 115736183
NCBI-ProteinID: XP_030523598
UniProt: A0A8B8NN76
LinkDB
Position
4:7356495..7362185
AA seq 103 aa
MSMYIRVKRSKTTYFIQCEPTETILNVKEKLQNLIDQPANDQRLILVGTGEVLEDSKSLA
DQKVENDAVVALTLRKDDNEFEEVNIVRPTDFYQSLDGDGSKW
NT seq 312 nt   +upstreamnt  +downstreamnt
atgagtatgtacattcgtgttaagcggagtaagacgacttactttatccagtgtgaaccg
actgagacaattcttaatgtcaaggagaaactgcaaaacctcatagaccaacctgctaat
gatcaacgtttgatcttggtagggactggggaggtgctggaggattcaaaatcactagca
gatcaaaaggttgaaaacgatgccgtggttgcactgaccttgaggaaagatgacaatgag
ttcgaggaagtgaacattgttcggccgaccgatttttaccaatctctcgatggagatgga
agcaaatggtga

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