KEGG   Rhodamnia argentea (silver malletwood): 115736216
Entry
115736216         CDS       T10595                                 
Name
(RefSeq) uncharacterized protein LOC115736216
  KO
K10842  CDK-activating kinase assembly factor MAT1
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03022  Basal transcription factors
rarg03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    115736216
  09124 Replication and repair
   03420 Nucleotide excision repair
    115736216
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:rarg03021]
    115736216
   03400 DNA repair and recombination proteins [BR:rarg03400]
    115736216
Transcription machinery [BR:rarg03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     115736216
DNA repair and recombination proteins [BR:rarg03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     115736216
SSDB
Motif
Pfam: MAT1
Other DBs
NCBI-GeneID: 115736216
NCBI-ProteinID: XP_030523648
UniProt: A0A8B8NNV4
LinkDB
Position
4:7329519..7333456
AA seq 187 aa
MVVSGTNPHNREMAIRRRMASIFNKREDDFPSVKEYNDYLEEVEEMTFNLIEGMDVPTIE
AKIAKYQEENAEQIMINRAKKAEEFAAALAASKGLPPQGDPDGALNSQAGLSVGTQGQYA
PAIAGGQPRPTGMAPQPVPLGTGLDIHGYDDEEMMKLRAERGGRAGGWSIELSKKRAIEE
AFGSIWI
NT seq 564 nt   +upstreamnt  +downstreamnt
atggtagtttctggcactaatccccacaacagggaaatggccattaggaggaggatggcc
agcatattcaataaaagagaagacgattttccatccgtgaaagagtacaatgactacttg
gaagaagtggaggaaatgacattcaatctgattgaaggaatggatgtgccgactattgaa
gcaaagattgcaaagtaccaggaagaaaatgctgagcagattatgattaatcgcgcgaag
aaggctgaagagtttgctgcagcgttggctgcaagcaaggggctgcctccccaaggtgat
ccagacggggctcttaactctcaagcaggattgagtgttgggacacagggacaatatgct
cctgcaattgctggaggacagccacggccaactggcatggccccacagccagtgccactt
gggactggccttgacatccatggatacgatgatgaagaaatgatgaagctccgagccgaa
agaggaggaagagcgggagggtggagcatagagctaagcaagaaaagggctattgaagaa
gcatttggaagcatttggatatga

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