Rhodamnia argentea (silver malletwood): 115736517
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Entry
115736517 CDS
T10595
Name
(RefSeq) TATA-box-binding protein 2
KO
K03120
transcription initiation factor TFIID TATA-box-binding protein
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
115736517
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rarg03000
]
115736517
03021 Transcription machinery [BR:
rarg03021
]
115736517
Transcription factors [BR:
rarg03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
TATA-binding proteins
115736517
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
115736517
RNA polymerase III system
TFIIIB
115736517
RNA polymerase I system
SL1/TIF-1B
115736517
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TBP
DUF3378
DUF4295
Motif
Other DBs
NCBI-GeneID:
115736517
NCBI-ProteinID:
XP_030524106
UniProt:
A0A8B8NNL5
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All DBs
Position
8:complement(9922180..9926944)
Genome browser
AA seq
200 aa
AA seq
DB search
MADQGLEGSQPVDLSKHPSGIVPTLQNIVSTVNLDCKLDLKAIALQARNAEYNPKRFAAV
IMRIREPKTTALIFASGKMVCTGAKSEQQSKLAARKYARIIQKLGFPAKFKDFKIQNIVG
SCDVKFPIRLEGLAYSHGAFSSYEPELFPGLIYRMKQPKIVLLIFVSGKIVLTGAKVREE
TYTAFENIYPVLTEFRKIQQ
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcagggcttggagggaagccaaccggtcgatctgtccaagcatccttcagga
atcgttcctactcttcagaacatagtctctacagtgaatttggactgcaaattggatctt
aaggcaattgctttgcaagctcgaaatgctgagtataatcctaagcgttttgctgctgta
attatgagaataagggagccaaaaacaacagcattgatatttgcttcagggaaaatggtt
tgtactggagccaagagtgaacaacaatcgaagttagcagcacgaaagtatgctcgaatc
attcagaaactcggattcccggctaaatttaaggatttcaaaattcaaaatatcgtgggt
tcttgtgatgtgaaattccctatcaggcttgaaggtcttgcatattcacatggtgccttc
tcaagttatgaaccagagctgttccctggcttgatatatcgaatgaaacaaccaaaaatc
gtgctgctaatctttgtgtcaggaaaaattgtcctcactggggcaaaggtgcgagaagag
acatacactgcctttgagaacatatatcctgtgctcaccgagttcaggaaaatccagcaa
tga
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