Rhodamnia argentea (silver malletwood): 115736588
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Entry
115736588 CDS
T10595
Name
(RefSeq) splicing factor 1
KO
K13095
splicing factor 1
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115736588
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rarg03041
]
115736588
Spliceosome [BR:
rarg03041
]
Complex A
Other components
Complex A specific factors
115736588
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Gene cluster
GFIT
Motif
Pfam:
KH-I_KHDC4-BBP
KH_1
SF1-HH
Motif
Other DBs
NCBI-GeneID:
115736588
NCBI-ProteinID:
XP_030524215
UniProt:
A0A8B8NNX6
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Position
8:9453318..9459835
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AA seq
816 aa
AA seq
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MNMKVDQSSDIEPAGLKMGGASAASTSSPKVSMFKKSGFVIPKNKLSGSMVPIFRGNKKL
GGGDTASEESGKQGQRKTKWGPDLTQDAAVRRARALAYQTRVDQITKQLGSGILEIDENL
ESLSAAEQPCERSFNHVLDRESTKLLELEKREAIGEILKLNASFKAPPDYKPLLKEDRVL
IPVKEYPGYNFIGLIFGPGGDNRKRLEKETGAKIQVYAVKSGTRDKGEMISADGNDSQGS
FEEINVHISADTFEKVDAAMSVIELLVTSVSGNPAAASTTSASSPAESKNVPSYLNSSSV
DAVPVTSRGHLEDFMGSSQTPPQVQFQYSNPWFANTPHNAPANQFPGFIPSPNASAPSLN
SPGHQMPSLFGPRPAPLAAFNSLSQSPSLLPPRQNPSSQYMQNSVMMHPSGVGPPPRNFP
SFPQASLPAPPVHSAPMPFSVSQSPQTRMLAIPSFPQLPANATAGPQFDRPLVPAGGPSN
MMQVGPPPVPTSINLQPNIASSAPITNASAGSTSLIAGPTYPSAQSTPYSMAVSGSRPAG
VPVFSSMPPPMPIQSANSTQGALVPRLTMNPFPGSLPTPSPVPSGSPALSFQSAPSTFTG
NMHNFTPIRSPANAAPSPHRPNFGDFTFQPQQPQGALTFSGPGVQTPLPQPTSFRPPIHD
SQPITPVLLRPSMGAQTARPQGGPSPIPFPGDLSRFPSFPVLGPTPVSQMGPRNMNLAAQ
LPDLAGSFPSRPGNPMEAQRTFHGQMNQQPRHHFIHSPSAFPGRPALGPGGRQIYDPFSP
TSAPNAPQQHGGNPAIGKRQENDPEYEDLMASVGVK
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgaacatgaaggttgaccagtcatctgatattgaacctgctggattaaagatgggaggg
gcttcagcagcatcaacatctagccccaaggtctccatgttcaagaaatctggttttgtc
attccaaaaaacaagttatcaggttcaatggttcccatctttagaggaaataagaagctg
ggtggtggtgatacagctagtgaggaaagtggcaaacaggggcagaggaaaacaaaatgg
ggacctgacttgacccaagatgctgcagtcaggagagcaagagccttggcctatcagact
cgggtggaccaaattacaaaacaactagggtcgggaattttggagattgatgagaatctg
gaatcactgtcagcagctgaacagccttgtgaaagatcttttaatcatgtccttgacaga
gagtcgacaaaattgttggagcttgaaaagcgggaagctataggcgaaatcctcaagtta
aatgcaagtttcaaggcaccacctgattataaacccctgttgaaagaggacagagtgctc
attcctgtaaaggagtatcctggatacaatttcattggcttgatctttgggcctggaggt
gataatcgaaagagactagaaaaggaaactggagctaagatacaggtgtatgctgtcaag
tctgggaccagggataagggtgaaatgatttcagctgatggaaatgattcccagggttct
tttgaagaaataaatgtgcatatatctgctgatacatttgagaaagttgatgcagcaatg
tccgtcattgaattgctagtaacatctgtatctggtaatcctgctgctgcttctacaaca
tctgcttcgagtccagctgagagcaagaatgtccccagttatttaaactcatcttctgtg
gacgctgttccagtaacaagtcggggacaccttgaagattttatgggttcctcacagact
cctcctcaggttcagtttcaatattcaaatccatggtttgccaacaccccccacaatgct
ccagcaaatcaatttcctggtttcattccatcaccaaatgcttcagcacctagtctgaat
agtcctggccatcaaatgccttctctctttggtcctcgaccagctcctctagctgcattt
aactccttatctcagagtccatctctgctcccgccaagacaaaatccatcctctcaatat
atgcaaaattcagtaatgatgcatccttctggtgttggtcctccaccaagaaattttcct
tcatttccgcaggcttcattaccggctccaccagttcattcagctcctatgcccttttct
gtgagccaatcgccacaaaccagaatgctagcaattccttcatttcctcaactcccagca
aatgctacagcaggaccacagttcgatcgtcccttagtaccagctgggggccctagcaat
atgatgcaggtgggtccaccccctgtgcccacatccatcaacctacaaccaaacattgcg
tcttcggcaccaattacaaatgcttcagctgggagcacaagcttgatcgcaggtcctacc
tacccatctgctcaatcaactccatactcgatggctgtgtcagggagtcgtcctgctggt
gtccctgtgttctcttctatgccaccaccgatgccaattcaatctgcaaacagcacacaa
ggggcacttgtccctcgtctgacaatgaacccttttccaggatctctgccaaccccttca
ccagtgccgtcaggatcacctgccctgtcttttcagtcagccccaagtactttcactggg
aatatgcacaattttacccccattagatcgccagctaatgctgctccaagtccacatcgt
ccaaatttcggggatttcactttccagcctcagcagccgcaaggcgcacttaccttctct
gggccaggagtacaaactcctttacctcagcctacctctttccgcccacctatacatgat
tctcaacctataacgcctgtcctcctaaggccatcaatgggagcgcagacagctcgacct
caaggcggcccatccccaattccatttccaggagacctgtcgagatttccctcgtttcca
gtgttgggccccacaccagtatcccagatggggccaaggaacatgaatctggcagcccaa
cttccggaccttgctggcagttttccctccaggcctggcaatccgatggaagctcagagg
accttccatggtcaaatgaatcaacagccgagacaccactttattcacagtccatctgcc
tttcctggcagaccggccctaggccctggtgggaggcaaatttacgatccgttctcaccg
acctcggctcctaatgcacctcagcagcacggagggaatccagcgattggaaagagacag
gagaatgaccccgagtatgaagacttgatggcctctgttggagtaaaatga
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