Rhodamnia argentea (silver malletwood): 115737056
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Entry
115737056 CDS
T10595
Name
(RefSeq) protein transport protein SEC16B homolog isoform X1
KO
K20353
COPII coat assembly protein SEC16
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
rarg04131
]
115737056
Membrane trafficking [BR:
rarg04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
115737056
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_Sec16
Sec16
Motif
Other DBs
NCBI-GeneID:
115737056
NCBI-ProteinID:
XP_030524868
UniProt:
A0A8B8NSI6
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All DBs
Position
9:complement(4258821..4267858)
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AA seq
1457 aa
AA seq
DB search
MASNPPFEVEDQTDEDFFDKLVDDDDDFGPSGSASASSSDAARKFSNLSIEDSGGVADPK
LKREESADFGVASQVALPAGEKKALLPSSSFDLSSTVDAEPIKGAAVESLNDGSGHDATG
SGDHIDAASGSLSVAAGESSALASANSFEFDSLIESNYNSTGSQDLVDPVKEKDSGAGGG
IKEVGWSSFHAEAVEHTQGHGFGSYSDFFTSLDNIGGQFSGNFPEDSNHESVIAAGSAKN
QADGLENSAHYAQYQQDQGYGAGDHQTANVQDLSGSQHWENLYPGWKYDSTTGQWYQVDG
YDANMNLQGNSDNSAVQEWPASSDGTSEVSYLQQTAQSVMGTAAEPGTTESVYSMNQVSE
GNNGYPDHMVFDPQYPGWYYDMIAQEWRTLESYTSSLQTSGQCHGYQNQDGSITTDVMSQ
AHNGIHGDYGQANNYGSQINVGQSQDGHWNGSYSEYSQPSRNDTRQVGTVATSNAISNFG
GKQQFDTLYGSEVAPNNHINPQNSFNSFGAVGLHGKSGWNNSEVQGAFGPQSFIPSQPFN
QANVEQHDQLHFSNDFYANQKPANFPQQSFQGTHQFTPAPNLGLSSAGRPAHALVTFGFG
GKLIVIKDATFASNPSYGGQDSSGSSIAVLNIIEVFQKKNDASGYGFGACNYLHALCEQS
FPGPLVGGSVGSKELNKWIDERITNCESPDMDYKKTEALKLLLSLLKIACQHYGKLRSPF
GTETAFKEGDSPETAVAKLFASVKKNNGPFGGYNSESRCLQFLPSSEQIQATASEVQNLL
VSGRKKEALQCAQEGQLWGPALILASQLGDQFYVDTVKQMALIQMVPGSPLRTLCLLIAG
QPAEVFSADATPVSDPVTTIMSQRPAQPGTNGMLDDWEENLAVIAANRTKDDELVIIHLG
DSLWKERSEIIAAHICYLVAEANFESYSDTARLCLVGADHWKCPRTYASPGSIQRTELYE
YSKVLGNSQFVLLPFQPYKLIYAYMLAEVGKVSDSLKYCHALSKSLKTGRAPEVEMWKQA
VLSLEERIRTHQQGGYSTNLAPAKLVGKLLNFFDNTAHRVVGGLPPPAPSTSQASFQGIE
QFQQPVATKVSSSQSTMAMSSLMASASMEWTADSNKMTMPNRSVSEPDFGRTPRQVDSSH
EITSANAQGKASASERTSRFGRFGFGSQLLQKTVGLVMRPRSDRQAKLGEKNKFYYDEKL
KRWVEEGAEPPAEEPALAPPPTTAAFQNGVPDYNLKSALKSEGLVPNGSPDFRSSTPSDH
TSGIPPIPPSSNQFSARGRMGVRSRYVDTFNQGGGSPANLFQSPSVPAVKPAVAANAKFF
IPTQVVSSGDQAMEAIAESAQEETSTTEEPSTSSAYDLFKTSAPPSTSMQRFPSMGNIPS
KEATSNQNGSFQSHSRRTASWSGSFNDALHPPKNAEIKPLGEALGMPPSAYMPSNPTSMP
MPVNGGGFADDLHEVEL
NT seq
4374 nt
NT seq
+upstream
nt +downstream
nt
atggctagcaatcctccatttgaggtggaggatcagaccgacgaggacttcttcgacaaa
ttggtggatgatgacgatgattttggtccttcaggatcggcctctgcttctagctccgat
gcagcgaggaaattttctaatttgagcattgaagattcgggtggagtggctgatccgaag
ctgaaaagagaggagtctgctgattttggagtggcgtctcaggtcgcactgcctgcaggt
gagaagaaggctcttctgccttcgagctcgtttgatctcagttctacagttgatgcggaa
ccgattaaaggtgcagcggtggagagtctgaatgatgggagtgggcacgatgcaacgggg
agcggagatcatatagatgccgcctcaggatcgctgagtgtggctgcaggtgagagcagc
gcattggcgtcggccaattcgtttgagtttgacagtctgatcgagtcgaattataatagc
acagggtctcaagatttggttgatccagtgaaggaaaaggatagtggagctggtggggga
atcaaggaagtgggatggagctcatttcatgcagaggctgttgagcatacgcagggtcat
gggtttggatcctactccgattttttcactagcttggacaatattggtgggcagttctct
ggtaattttccggaggattcaaaccatgagtcagtaattgcagcaggtagtgccaaaaat
caggctgatggattggaaaactctgcacattatgcacagtatcagcaggaccaaggctat
ggggctggcgatcaccaaaccgctaatgtgcaggatcttagtggtagtcagcattgggaa
aatttatatccggggtggaaatatgactccactaccggacagtggtatcaagtggatggt
tatgacgccaatatgaatctccaagggaactctgataatagtgcagttcaggaatggcct
gctagttctgatggaacatcagaggtttcttatttgcaacaaactgctcagtctgtcatg
ggaactgctgcggagcctgggacaactgagagtgtctatagtatgaatcaggtttcagag
gggaataacggctatccggatcatatggtatttgatcctcagtaccctggttggtattat
gatatgattgcccaggaatggcgtacactggagagttatacttcttctttacaaacatca
ggtcaatgtcatggttaccagaatcaagatggatcgattaccactgatgttatgagtcaa
gctcataacggcattcatggtgactacggacaggctaacaattatgggtcacaaattaat
gttggtcaaagccaggatggtcattggaatggctcgtatagtgaatacagtcaaccgagc
aggaatgatactcggcaagtaggaacagttgcaacaagcaatgcaatttcaaatttcgga
ggaaaacagcaattcgacactctgtatggctccgaagttgctccaaataaccacatcaat
ccacagaattcgtttaattcttttggggcggttggattgcatggaaaatcaggctggaat
aatagtgaggttcagggggcttttggaccacagagctttatccccagtcaaccattcaat
caggcaaatgttgagcagcatgatcaactgcatttctccaatgatttttatgcgaatcag
aagccagcaaattttccccagcaatcttttcagggtactcatcagtttactccagcgcct
aacctaggactatcttcggcagggcgtcctgcccatgcgttagttacttttggatttggt
ggaaaactcatagtaattaaagatgcgacatttgccagtaatccatcatatggaggccag
gattcttctgggagctcaattgctgtcctcaacataattgaagtattccaaaagaagaat
gatgcttctggctatggatttggtgcttgcaactatttgcatgctttgtgcgaacaatcc
tttcctggtcctctagttggtggaagtgttggaagtaaagagttgaacaaatggattgat
gaaaggattaccaactgtgaatctccagatatggattataaaaaaacagaggctttgaag
ttgcttctgtctttgctgaagatagcctgtcagcattatggtaaacttcgatctcctttt
ggcaccgaaactgcctttaaggaaggcgatagtcctgaaacagcagttgccaaacttttt
gcatccgttaagaaaaataatggaccatttgggggttacaattctgaaagccgctgcttg
cagtttttaccttcttctgaacaaattcaggcgactgcctctgaggtgcagaatcttctg
gtttctggaagaaaaaaagaggctctacagtgcgcacaagaaggtcagttgtggggacca
gcccttatacttgcctcacaattgggggatcagttttatgtagatactgtaaagcagatg
gcactcatacagatggtacctggatcaccgttgcggacgttgtgcttgcttattgcaggt
caaccagctgaagtcttttcagcggacgccacccctgttagtgatcctgttaccacaatt
atgtctcaacgtcctgctcagcctggtaccaatggtatgcttgacgactgggaggaaaat
ctggctgtaattgctgcaaacagaaccaaagatgacgaacttgtaattattcaccttggg
gattcactatggaaggaaagaagtgagataattgcagcacatatatgctatctagtggcc
gaagcgaattttgagtcatattcagacactgcaagactgtgtcttgttggagcagatcac
tggaaatgtccacgaacttacgccagtccagggtctatacagaggacagagttgtatgaa
tattcaaaagtgctaggaaactctcagtttgtcctgctacccttccagccatataagctc
atatatgcctatatgttggctgaagtgggaaaagtttctgactcactaaagtactgccat
gcactatcgaaatctttgaaaactgggcgagcccctgaagtagagatgtggaagcaagcg
gttttatctcttgaggagcggattagaactcatcaacagggtgggtattcaacaaacttg
gctccggcaaagttagttggtaaattgctcaacttttttgacaatactgcgcatcgggtt
gttggggggttaccaccacctgcaccatcaacgtctcaggcaagttttcaaggtatcgaa
caattccaacagccagtggctactaaagtttcgagtagtcaatcaacaatggctatgtca
tctttaatggcatctgcttcaatggagtggacggctgatagcaacaaaatgacaatgcct
aacagaagtgtctcagaaccagattttgggaggacccctagacaggttgattcatcacac
gaaataacctcggctaatgctcagggtaaggcttcagcatcagagaggacatcccgcttt
ggtagatttggtttcggctcgcagcttttacagaagactgtgggactagtgatgagacca
cgctcggatcgtcaggctaaacttggcgaaaagaataagttttactatgatgagaagcta
aagagatgggtagaggaaggtgctgaacctcctgctgaggaacctgccttggctcctcct
ccaacaaccgcagcattccagaatggagtgcctgactacaacctgaagtcagcattgaag
agtgaaggacttgtccccaatggaagtccagactttagaagctcaacaccttcagaccac
acctcaggaattccacccatcccaccgagctcaaatcagttctcagcgcgagggcgtatg
ggtgttagatcaaggtatgttgacaccttcaaccaaggtggtggtagcccggcgaactta
ttccagtcaccatctgtgccagctgttaaacctgcagtggctgctaatgcaaagtttttc
attccaacccaagtagtatcatcaggtgaccaggcaatggaggccatagctgaaagcgca
caagaggaaacctcaactactgaagaaccgtcgacctcttctgcatatgacttattcaag
acatctgcacctccttcgacatccatgcaaaggttcccaagcatgggtaacatcccaagc
aaagaggctacgtcaaatcaaaacggttctttccaatctcactcgcgccgaacagcatca
tggagtggaagcttcaacgatgcattgcatccacctaagaatgcggagataaaacctcta
ggtgaggcattgggcatgcccccttcagcttatatgccgagcaaccctacttcaatgccc
atgccggtgaacggtggaggttttgcggacgaccttcacgaagtggaactttga
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