Rhodamnia argentea (silver malletwood): 115737252
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Entry
115737252 CDS
T10595
Name
(RefSeq) protein CHROMATIN REMODELING 25
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115737252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115737252
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
115737252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
DEAD
HDA2-3
AAA_22
SWI2_SNF2
SLFN-g3_helicase
Motif
Other DBs
NCBI-GeneID:
115737252
NCBI-ProteinID:
XP_030525155
UniProt:
A0A8B8NRM1
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Position
5:19622567..19632575
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AA seq
943 aa
AA seq
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MDDDEDVLPGGSDSYLPTEEEEEEEESEGEGGEGGSDDEEVEVIEGESRAGLNRRCKGSS
APTDGDEYRKSKNIDALLRGNLVVRRQALLPRVLSVMEGATVCRKPFKPPCTDGYDDRDG
QLHRRLLARKRFVPWGSSRPALVEVTNRLNVLPSAAEKDVEDEKVDLPPGVEPLVLWQPE
DSEVASGNAVSIEVDPLLVRFLRPHQREGVQFMFECVSGLCGNASINGCILADDMGLGKT
LQSITLLYTLLRQGFDGKPMVKKAIIVTPTSLVSNWEAEIDKWLGDRVQLIALCESTRDD
VISGIDRFTSPYSSLQVLIISYETFRMHSSKFSHNESCELLICDEAHRLKNDQTLTNRAL
AALSCKRRILLSGTPMQNDLEEFFAMVNFTNPAILGDIAHFRRYYEAPIICGREPTASEE
EKNLGCERSSELSAIVNQFILRRTNALLSNHLPPKIVQVVCCKLSPLQTELYNHFIHSKN
VKRAITEETKQSKILAYITALKKLCNHPKLIYDTVKSGSPGTSGFEDCIRFFPSEMFSGR
SGSWSGGDGAWVELSGKMHVLARLLAHLRQRTDNRIVLVSNYTQTLDLFAQLCRERRYPY
LRLDGTTTISKRQKLVNHFNDPSKDEFVFLLSSKAGGCGLNLIGGNRLVLFDPDWNPAND
KQAAARVWRDGQKKRVYIYRFLSAGTIEEKVYQRQISKEGLQKVIQQETSARAAEGNCLS
TEELRDLFTFHEKSRSEIHEKMNCIRCQHIDDAEIVGDRGDSALDQSTFSTDTSDIGSFA
EITGCLHKLKASERQMGTPKEEDLGSWGHHFSAKSVPDIVFQASAGDEVTFVFTNQVDGK
LVPIETAISEKIRTEESRLDLKQSMNQKPWLEQQRLKVRQSHRSSLTTVLSSLSKTSQES
ERRPLKIILKGTGIAQLRNKLSLAHQLPQKRPCDSSSELDDFS
NT seq
2832 nt
NT seq
+upstream
nt +downstream
nt
atggacgacgacgaggacgttctccctggaggttccgattcgtacctcccgaccgaagaa
gaagaagaagaagaagaaagcgaaggagaaggaggagaaggcggaagcgatgatgaggaa
gtagaagtcatcgagggagaatctagggcaggtctcaaccgtagatgtaaaggctcctct
gcaccgaccgacggcgacgagtaccggaagtcgaagaacatcgacgctcttttgagaggc
aacctcgtcgtgagaaggcaggcattgttaccgagagtgctctcggtgatggaaggagct
actgtgtgtcggaaacccttcaaaccgccctgcactgatggatatgatgatagggacgga
cagcttcaccgtcgtcttttagcccgtaaaagatttgtaccatggggctcttcaaggcct
gctttggtggaagtaaccaaccggcttaatgtgttaccaagtgccgccgagaaggatgtg
gaggatgaaaaggtggatctgccacctggggttgaacctctggtgctgtggcaacctgaa
gattcagaggtcgcatctggcaatgcagtgtcaattgaagtggatccattgcttgtacgt
ttccttcgaccccatcaacgggaaggtgtccagtttatgtttgaatgtgtttcaggccta
tgtggtaatgccagcataaatggatgcattctggctgatgacatgggtttaggaaagaca
ttgcagtcgatcactttgttgtacacactgctccgtcaaggatttgatggaaagccaatg
gttaagaaagccatcattgtcactcccactagtcttgtgagtaattgggaagcagagatt
gataagtggctgggggacagagttcagcttattgctctttgtgaaagcacccgagatgat
gtcatttcaggaattgatcgttttacaagtccctatagctctctacaggttctcattatt
tcatatgagacattccggatgcattcgtccaaatttagccacaatgaatcctgtgaactc
ctcatatgtgatgaggctcatagactaaagaatgaccaaacattgacaaatcgggctttg
gctgctctctcttgtaaacgtcgcatattgttgtcaggaaccccaatgcagaatgacttg
gaagagttctttgccatggttaattttacaaatcctgcaatcttgggtgacatcgcacac
ttccgccgttactacgaggcgccaattatctgtggaagagaacctactgccagtgaagag
gagaaaaatctaggttgtgaacgctcttcagagctcagtgccatagtaaatcagttcata
ctaaggaggacgaatgctcttctatcaaatcacctaccaccaaagatagtacaagttgtt
tgttgcaagttgtctccacttcaaacagaactttataaccatttcatacattccaaaaat
gtcaaacgagcaatcaccgaggaaacgaagcaatcgaaaattcttgcttacatcacagcc
cttaagaagctgtgcaatcatccaaaactgatctacgatactgtgaaaagtggaagtccc
ggaacttcagggtttgaagactgcatacggtttttcccttcagagatgttctcaggaagg
tctggatcctggagtgggggtgatggggcctgggttgaactctcaggaaaaatgcacgtc
ttggcccggttgctagcccatcttcgtcaacggacagataatcgcattgtccttgtctca
aactatactcagacattggatctctttgcccaattgtgtcgtgaaagaagatatccatat
ttgaggcttgatggaaccacaacaatcagcaaaagacaaaagttagtcaatcatttcaat
gacccatcaaaggatgagtttgtattcctcttgagcagcaaggctggtggctgtggccta
aatttgattggaggtaatcgcctggtcttgtttgatccagactggaacccggccaatgac
aagcaagctgccgccagagtatggagggatggacagaaaaagagagtatatatttacaga
tttttaagcgctggaacaattgaagaaaaggtatatcaacgccagatatcaaaagaaggt
cttcaaaaagttattcaacaggagactagtgcccgtgcagcagagggaaattgcctttcg
acggaagaactgcgcgatctattcacatttcatgaaaagtcgaggtctgagattcatgaa
aagatgaactgtattcgctgtcagcacattgatgatgccgaaattgttggtgacagagga
gatagtgcactggatcaaagtaccttttcaacagatacttctgacataggttcatttgca
gaaataactggatgcttgcacaagttaaaggcctcggaaagacagatggggacaccgaag
gaagaggacttaggcagttggggccatcatttttcggctaaatcagtaccagatattgtc
ttccaagcttcagctggtgatgaggtaacatttgtctttacaaatcaagtggatgggaag
cttgtcccaattgagacagctatcagcgaaaagatcaggacagaggagagcaggctcgat
ctgaagcaaagtatgaaccagaaaccctggctagaacagcagcgtttaaaggtgcgacag
tcgcatcgcagttccctcacaacagttctatcttcgttgtccaagacttcacaagagtca
gaaagaagaccacttaaaatcatcctaaaagggacaggcattgcacagctgaggaacaaa
ctgtctcttgctcatcagttgccacagaaaagaccatgcgatagtagttcagaactcgat
gacttctcgtga
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