KEGG   Rhodamnia argentea (silver malletwood): 115737358
Entry
115737358         CDS       T10595                                 
Name
(RefSeq) UBP1-associated protein 2C isoform X1
  KO
K12741  heterogeneous nuclear ribonucleoprotein A1/A3
Organism
rarg  Rhodamnia argentea (silver malletwood)
Pathway
rarg03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:rarg00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    115737358
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rarg03019]
    115737358
   03041 Spliceosome [BR:rarg03041]
    115737358
Messenger RNA biogenesis [BR:rarg03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Other transport factors
     115737358
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     115737358
Spliceosome [BR:rarg03041]
 Common components
  Common spliceosomal components
   hnRNP proteins
    115737358
SSDB
Motif
Pfam: RRM_1 RRM_7 Cut8
Other DBs
NCBI-GeneID: 115737358
NCBI-ProteinID: XP_030525301
UniProt: A0A8B8NS06
LinkDB
Position
2:complement(27791258..27795660)
AA seq 467 aa
MDLAKKRKMDDNGVALSDSSDPNLALTRDEGRRMLESFSKDQLLDILQEALLRHPDVLSA
ARSVADGDPSRRKLFIRGLGWDTTHDSLRALFSAYGELEEAVVILDKVTGKSKGYGFVTF
KHVDGALGALREPSKRIDGRVTVTQLAAAGNSGASTGNSADVSDRKIYVANVPIDMPADK
LLSHFLMYGEIEEGPLGFDKQTGKSRGFALFVYKTAEGAQAALAEPVKNIEGRQLNCKLA
IDGKRKPGPAGNVGHGNGHADAVGMSGPGSMPGSVPGQYGGPGGMGSYGGFQGPPGLVHL
SSGGPGMSAVGSQVPPTLGGAGGYGGGMVAQYGGYGGPGATGYGSALGAVGTGLGGAGGG
VGGTSSGLGTAGGSSLYRPSGGYPESGQYGLSSGSAYPSQQHQPTGTSPAPRVPPGGMYP
NVPSYYSGNLIYDYYALLLGYVIHTVFLFHLLLYFLCACALSVMSCA
NT seq 1404 nt   +upstreamnt  +downstreamnt
atggatctcgcaaagaagcggaagatggatgacaacggcgtggcgttgtcggactcctcc
gatcccaaccttgctctcacccgcgacgagggccgcaggatgctcgagagcttctccaag
gaccagctcctcgacatcctccaggaggccctgctccgccaccccgacgtcctctccgcc
gcccgctccgtcgccgacggcgacccctctcgccgcaagctcttcatccgcggcctcggc
tgggacaccacccacgacagcctccgcgcgctcttctccgcctatggggagctcgaggaa
gccgtcgtcattctcgacaaggtcacggggaaaagcaaaggttatggcttcgtcactttc
aagcacgtggacggcgctctgggagccctgcgtgagccgagcaagaggatcgatggacgc
gtcacggtcacgcagctcgcggcagctggtaattcgggtgccagcacgggcaattcggcc
gatgtctcagaccggaagatctatgtggcaaacgtgccgatagatatgcctgcggataag
ctgttatctcacttcctgatgtatggtgaaatcgaagaagggccgctagggttcgataag
cagactgggaaatctagagggtttgctctctttgtttataagacagccgagggagctcag
gcggctttggccgagccagtgaagaacattgaggggaggcaactaaattgcaagctcgca
attgatgggaagaggaagccgggcccagctggtaatgttggacatggtaatggccatgct
gatgcagtggggatgagcggcccaggttcaatgccagggtcggttcctggacaatatggt
ggacctgggggaatggggtcatacggtgggtttcagggtccgcctggattggtacatttg
agttcgggcgggcctgggatgtcagcggtgggcagtcaggtgcctcccactttaggtggt
gctggcggatacggtggtgggatggttgctcaatatggtggttatgggggaccaggagca
actggatatggcagtgctttaggtgctgttgggactggtcttggtggtgcaggtggtggt
gtaggcggcacaagcagtggattaggcactgctggtggctcatctttgtacaggccttcc
ggagggtatccagaaagtggacagtatggcttatcgtctgggtcggcatatccgagccag
cagcatcagccaacagggacttctccagcgccaagggttccaccaggaggaatgtatccg
aatgtgccttcctattactcaggtaatctcatttacgattattatgctttattacttggc
tacgtgattcacacggtctttcttttccaccttctgctttatttcctttgtgcgtgtgct
ctatctgtgatgtcatgtgcctaa

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