Rhodamnia argentea (silver malletwood): 115737453
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Entry
115737453 CDS
T10595
Name
(RefSeq) homeobox-leucine zipper protein ROC8-like
KO
K09338
homeobox-leucine zipper protein
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rarg03000
]
115737453
Transcription factors [BR:
rarg03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
115737453
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDF2_C
START
Homeodomain
Homeobox_KN
CHP02642
Motif
Other DBs
NCBI-GeneID:
115737453
NCBI-ProteinID:
XP_030525432
UniProt:
A0A8B8NSD1
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Position
2:complement(34229554..34233834)
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AA seq
727 aa
AA seq
DB search
MADSGGSGGSGEEHEHRLGSHPSPSPNPSSSSRKGKGKTKTYHRHTPHQTQRLEAFFKDF
PHPDENQRRQLSRELGLDPQQIKFWFQNKRTQRKTQNERSDNTALRAENERIHCENLAIM
EALKSVICPACGGPPLGEEERQCNLEKLKMENVQLKEEHAKASNILAKYIGKPFSHIESL
LPGPRSSAEVSTASVPSHRVSVRNVDFQVSPINTASSSPLKVIPGTEMANTVEITAHAMD
ELIKVVRMKDQLWIESPLDGRYILHHDTYEQMFSRNYRFRGFGARLETSKESVLVTMEPS
SLVSIFLDVSKWADMFHTIVTKASSIPVLEEETQVNHRTHLQLIHAQMHVLSPLVPARDV
YFLRRCQQIELGKWVIVDVSYNHMKDDASPYNTWRLPSGCVIQAMRDGCSKVTWVEHVEV
EDKNQAHKLFRDLVCGSLTYGAERWAITLQRMCERFAYTMLDDALTHDAVEAGITSSPVI
VVPEGRRNVMKLAHRMVKNFCASLSMSGKLDFPHLSEVNNSGVRVCVRKSEEPGQPSGTI
VSAATTLWLPLVPQVVFNYFRDENTRVQWDVLCNGNSVQEIARIQSGTHRGNAISIIQSS
LHAENLLLLQESSIDPLTCMVVYAPIDSTAIAIALSGGDTSTVQILPSGFTISSDGRPNP
GSRPSTSTSPSKPAAAAGTLLTVAFQILVSTPSGLEQLNVESVATVNTLISATVQKIKAA
LNCSAPE
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggctgattctggaggtagtggcggttcaggtgaggaacatgagcataggctaggatct
catccgagtccgagtccgaatccaagctcaagctcaaggaaagggaaggggaagacgaag
acgtaccatcgtcacactccacaccagacacagaggctagaagcatttttcaaggatttc
ccgcaccctgacgagaatcaacggcgtcaacttagcagagaacttgggctcgaccctcaa
cagatcaagttctggtttcagaacaagaggactcagagaaagactcaaaatgaacgatca
gataacacagctcttcgggctgagaatgagaggatacactgcgaaaacctcgcgatcatg
gaggcgctcaagagcgtgatttgcccagcctgtggcggtccacccttgggtgaggaagag
aggcagtgtaatttggagaaactcaagatggaaaatgtgcagttgaaagaagagcatgca
aaagcatccaacattctcgccaaatatatcgggaaaccattctcgcacattgagtcgctg
ctgcctggccctagatcctctgcggaagtgtccacggcaagtgtccccagccaccgggtt
agtgttcgcaatgttgatttccaagtgtcccccatcaacactgcatcttctagcccgtta
aaggttataccagggacagaaatggccaacacagtggaaattactgcacatgccatggat
gagttgatcaaggttgtgcggatgaaagaccagttgtggatagagtctcctctagacggg
agatacatactccatcatgatacctacgagcagatgttttctcgaaactaccgtttcagg
ggctttggggctcgtctggagacatccaaggaatcagttcttgtgacgatggaaccgagt
agcttggttagcatattcctagacgtgagcaaatgggctgatatgttccacacaattgtc
acaaaagcttcttctattccagttcttgaagaagaaacgcaagttaatcacagaactcac
ttgcagctgatacatgcacaaatgcacgtactttctccgctagtgccggctcgggacgtc
tactttcttcgccgttgccaacagattgagctaggcaagtgggtgatagtggatgtgtcc
tacaatcacatgaaagatgatgcgagcccttacaatacgtggaggcttccttctggctgc
gtgattcaggccatgcgtgatggttgctccaaggtcacttgggtggaacatgtagaagtg
gaagacaaaaaccaagctcataagcttttcagggatctagtgtgtggcagtctcacgtac
ggtgcagaaagatgggcaattacgctccaaagaatgtgcgagagattcgcttacaccatg
ctggatgatgcgctgacccatgatgctgttgaagctggtattactagttcaccggtcatt
gttgttcctgaaggtaggagaaatgtgatgaagctggctcacaggatggtgaagaatttc
tgtgcgagcctgagcatgtctggcaaattggatttccctcacctgtctgaggtaaacaac
agtggggttcgtgtctgtgtacgaaagagtgaagaaccgggacagcccagcggcacgatt
gttagtgcggccacaaccctttggcttcctcttgtgcctcaagtggtcttcaattacttc
agagacgaaaatacacgagttcagtgggatgtactctgcaacggaaattcagtgcaagag
attgcacgcatacagagcggcactcatcggggaaacgcaatctccattattcagtcttct
ctgcatgccgagaacctgttgttgcttcaagagagtagcatagaccctttgacgtgcatg
gtggtttatgccccaatcgattcaacagcgattgccatcgcgttaagcggaggggacact
tcgacagttcaaattcttccatctggattcaccatctccagcgatggcaggcccaatccg
ggatcaagaccttccaccagcacaagccccagcaagccggcagcggcggcaggtacacta
ctcaccgtggcattccagatattggtttccaccccctcaggtctggagcagctcaatgtg
gaatccgtggcgaccgtaaacactcttattagtgcgaccgttcagaaaattaaggctgct
ctaaattgctctgccccggaatga
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