Rhodamnia argentea (silver malletwood): 115737647
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Entry
115737647 CDS
T10595
Name
(RefSeq) DNA-(apurinic or apyrimidinic site) endonuclease, chloroplastic isoform X1
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115737647
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115737647
Enzymes [BR:
rarg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
115737647
DNA repair and recombination proteins [BR:
rarg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
115737647
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
SAP
Exo_endo_phos_2
Motif
Other DBs
NCBI-GeneID:
115737647
NCBI-ProteinID:
XP_048137970
UniProt:
A0ABM3HMZ5
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Position
7:complement(10628225..10634978)
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AA seq
527 aa
AA seq
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MPLCCVSSSCSATVFAAAPRFWVGRSVVQLGASEMGSKRGVSNSSIPESATSEDKEGKKL
KGLVASVPSSGTSHIKENSGESITDVVGLKNDLARIEAMTFQELRATLRRIGIPAKGRKP
DLISALKCYFDQEMNVSKREENSDEKNCVEIGSESKSKMQRSKREKQSTREITMKVDGIV
IRSKQMQSTVTDEIAGEMAKGKMAKGEILSISKKQVTGICIEGGGGEVNGMIEPWTILTH
KKPQKHWVAYNPRTMRPPPLSRNVNSVKLMSWNVNGLRALLKMEGFSAGQLAQREMFDVL
CLQETKLQEKDVEAIKDRLMEGYENSYWTCSVSKLGYSGTAIISRKKPLSVTYGLGISDH
DSEGRLITAEFDSFYLLSSYVPNSGDGLRRLTYRTTEWDPSLGSYIKELEKSKPVILTGD
LNCAHQEIDIYDPAGNKRSAGFTIEERESFEANFLSRGFVDTYRRQHPHAVGYTYWGYRH
GLRKTNKGWRLDYFLVSESIAGKVHDSYILPDISGSDHSPIGLILKL
NT seq
1584 nt
NT seq
+upstream
nt +downstream
nt
atgcccttgtgctgcgtctcttcttcctgctcagcaacagttttcgcagcggctccgaga
ttctgggttggtcgttctgttgtccaactcggagcaagcgaaatggggtccaaaaggggc
gtttctaattcatcgatacctgagtcggcgacttctgaggacaaggaagggaagaaattg
aaaggattagtggcttcagttcctagttctggcacaagtcatatcaaggaaaattctggt
gaaagcatcaccgacgtcgtaggccttaaaaatgacctggccagaattgaggcgatgaca
tttcaggaattgagagctacattgaggagaattggaatcccggccaaagggcgtaaaccg
gatctaatatctgcgttgaagtgttatttcgatcaagaaatgaacgtttcaaagagggaa
gagaactctgatgagaagaattgtgttgaaattggctccgagtcaaaatctaaaatgcaa
agaagtaagagggaaaaacagtctactagggaaataacaatgaaagttgatggtattgtc
atcagatcgaagcagatgcagtcaactgtgactgatgaaattgctggtgaaatggcaaaa
gggaaaatggcgaaaggggaaatattatccatttcgaagaaacaagttacaggaatttgt
attgaaggaggaggaggtgaagttaatggaatgatagaaccatggacaattctcacacac
aagaagccacagaagcactgggttgcttacaatcctaggaccatgaggcctccacctctt
tcacggaatgtgaattctgtgaagttgatgtcttggaatgtcaatggtttgagagcattg
ttaaagatggaggggttttctgctggtcagcttgctcaaagggaaatgtttgatgtattg
tgcttgcaggagaccaaactccaggagaaggatgtggaagcaatcaaagatcggcttatg
gaaggttatgagaacagctattggacctgcagtgtttccaaacttggttattctggtaca
gcaattatctcacggaaaaagcccctttcggttacatatggcttgggcatatcagatcat
gattctgagggacggcttatcactgcagaatttgattcattctatctcttgagcagttac
gttccaaattctggtgacggcctgagaagactgacatataggaccacagagtgggatccg
tctcttggcagctacataaaagaacttgaaaagtcgaagcccgtgattttgactggtgat
ctgaattgtgcccatcaggaaatagacatttacgatcctgcgggaaataaaagaagcgct
ggatttacaattgaagaaagggaatcttttgaggccaactttctgtcaaggggttttgtt
gatacctatagaagacagcatcctcatgctgttggttatacttattggggttatcggcat
ggtttgaggaagacaaataaagggtggcggctcgattattttcttgtttcagaatctata
gcaggcaaagttcatgactcgtacatccttcctgatatcagcggtagtgatcatagtcct
attggcctcattctcaagctttag
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