Rhodamnia argentea (silver malletwood): 115737682
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Entry
115737682 CDS
T10595
Name
(RefSeq) DNA-directed RNA polymerase I subunit 1 isoform X1
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03020
RNA polymerase
Brite
Enzymes [BR:
rarg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115737682
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115737682
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115737682
NCBI-ProteinID:
XP_048138659
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Position
7:10994138..11012791
Genome browser
AA seq
1712 aa
AA seq
DB search
MAQATDGGSEYVEAVSFGFLTDEEVRKHSVVKVTNTVLLDNVERPVAGGLYDPAMGTLDE
RTACKSCGQRSLNCPGHCGHIDLVSPVYNPLLFNLLYNLLKRTCFFCFHFRESRSQVDAC
VSKLELIAKGDVASAKELDFKWATSSSLVEANNAGDILSLPVNSELQHDSSTHQKQGEWT
SLQFNEAVSVLNKFLKPMHKKCKNCKAKSPAISKPTFGWFHMSGMTGAQTRGNIIRGNKL
DGQFLDGVGKENLSEMENIEGVALQNDGGNEAETPSSTFASPDSIGIAKKGHKRRGQSLS
DEYIRQKNFFSGPLLPSEVNEIMRLLWDNEARLCSFISDIQQQGSGNKATHSMFFLGTVL
VPPIKFRPPSKGGDSVMEHPHTVLLGKVLQANISLGNAHINQSQRATIISRWMDLQQSIN
VLFDSKTATGQGQRDVASGICQLLEKKEGMFRQNMMGKRVNYACRSVISPDPYLAVNEIG
IPPYFALRLTYPERVTPWNTFSLRKAIINGTEIHPGATHYIDKLSTLKLPPARKGRISIS
RRLPSSRGVVTQTGKSSDNEFEGKIIYRHLRDGDIVLVNRQPTLHKPSIMAHVVRVLKGE
KTLRMHYANCSTYNADFDGDEMNVHFPQDDISRAEAYNIVNANNQYVKPTNGSPIRALIQ
DHIVSAAILTKKDTFLNYDEFNHLLYSSGVSAAGSGSLRKLGKKVAIDFEENMLCPVPTI
WKPEPLWTGKQLIATVLDHLTRGYPPFTVEKRGKIPSAFFKTKLGRKIVRSEPGKDDAIK
HKPSKRKGTDKDKVKEQDKPRDFIRDKMKRNEEPGEDTVLIFKNYLICGVIDKAQFGDYG
LVHTVQELYGSNTAGILLSAFSRLFTAFLQMHGFTCGVDDLLLSKDVDEKRQQQLEECER
CGEEVHREVVGVKNSEFIYSAELQWKIEEVIRGNGDSALTNLDRRMISRLNELSSKKIEK
NLLSEGLFKPTAKNCISLMTTSGAKGGTANFQQISSHLGQQELEGRRVPRMVSGKTLPCF
PPWDWASRAGGFIIDRFLTGLRPQEYYFHCMAGREGLVDTAVKTSRSGYLQRCLVKNLEC
LKVSYDHTVRDADGSIVQFYYGEDGIDVHQTSFVAKFDALLANHDIMKAKYSTELRKSNS
YITDLPAALKDKANKFMCDRNLSVPGLAKNMMLKPEDFVKSVEQKYFSSLAQPGEPVGVV
AAQSVGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASTDIKTPILTCPLRRGRPK
DDATSLAEKLKKITVAERIESMEVAVVPFEVDNHNRQVYRRYKLKMKLNRTKFCSLEHCE
EILTVVYLRELEDAIQNHVLLLSKISGIKNFTSDSRPKTSSETDEDASGLASEHAEERNL
DDDADDDDDDGNDNDDLGFDGQKRKEQATDEMYYEDGYEEERNELELSAGLESDADQANE
FDSGKDEDGMPGIAPEIVSPSKTKKTKKKAKSNNKRKNRFIPKDFDRAIFVAANGLDFEV
HFRFTNEPHILLAQIAQKVAKKVYLRSSGKIESCQVISCKENQVIYYGEDPKRRQKIEAE
EKDAIPALHTNGADFRAFWQMQDELDIRYIYSNDIHAMLTTYGVEAARETIIREVQNVFG
SYGISVDIRHLTLIADFMTHTGGYRPMNRLGGIAESLSPFSKMSFETASKFIVDAAYHGV
VDKLETPSARICLGLPVKMGTGSFDLLQKLQL
NT seq
5139 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggcaacggacgggggctcggaatatgttgaggcggtcagctttggttttctg
acggatgaagaggtgcggaagcacagcgtcgtgaaggttaccaacactgttttgctcgat
aatgtggagaggccagtggccggtgggctctatgatccagcaatggggacgctggatgag
agaacggcttgtaaatcttgtggccagcggtcgttgaattgccccggtcattgcggtcat
attgacctcgtttctccagtctacaaccccttgctattcaatttgctgtataatcttctg
aaaaggacttgcttcttttgctttcatttccgggaaagtaggagccaggttgatgcatgt
gtttccaaattggaactcatcgcaaaaggtgatgttgctagtgcaaaagaactggatttc
aaatgggcgactagttcttcgctggtagaggctaataatgcgggcgacatattatctttg
cctgtgaactctgagttgcagcatgatagctctacgcatcagaagcagggagaatggacc
tcacttcagttcaacgaagcggtctcagttttaaataagtttttgaagccaatgcataag
aagtgtaagaactgcaaagctaaaagtcctgcgatcagtaaacctacttttggctggttc
cacatgagtggtatgactggagctcaaactagaggaaacattattagagggaacaaactg
gatgggcaatttttggatggagttggcaaggaaaatttgtctgagatggaaaatattgaa
ggtgttgctctccaaaatgatggtggaaatgaagctgaaactccatcatcgacttttgca
tctcctgacagtattggcattgcaaaaaaagggcacaaaagaaggggccaaagtttatct
gacgagtatatcaggcagaagaattttttctctggacctctattaccatcagaggttaat
gaaattatgagacttctgtgggataatgaagcacggctgtgctcatttatcagtgacata
cagcagcagggttctgggaataaagcaactcactctatgtttttcttggggactgttctt
gtacctccaatcaaatttcgtcccccatctaagggaggtgattcggtgatggaacatcca
catactgtcctattggggaaggtattgcaggccaatatctccttagggaatgctcacatc
aatcagtcgcaacgcgcaaccattattagccggtggatggatcttcaacaatcaataaat
gttctttttgatagcaaaactgctacaggtcaaggtcaaagggatgtggcttcaggcata
tgtcagttgctggagaaaaaggaaggcatgttccggcagaatatgatgggcaagagagtt
aattatgcttgtcgatctgtcatatctcctgatccttacttagcggttaatgaaatcggc
attcccccttattttgcattgagattaacatacccagagagagtaactccttggaatact
tttagtttgcggaaagctattatcaatggcacagaaattcacccaggagcaacacactac
attgacaagttatctactcttaaactaccaccagctagaaaaggtcgaatttcgatctca
aggagattaccttcatcacgaggggttgtcacacaaactgggaagagttctgataatgag
tttgaaggcaaaatcatatatcggcacttgagagatggagatattgttctggtcaataga
cagcctacacttcacaagcctagtataatggcacacgttgttcgtgtattgaagggggag
aaaacacttcggatgcattatgcaaattgcagtacatacaatgctgattttgatggtgat
gaaatgaatgtccattttccacaagatgatatttcacgtgctgaagcttacaacattgtg
aatgcaaacaatcaatatgttaagccaaccaatggctctcctattagagcattgatccag
gatcacattgtcagtgctgcaattcttacaaagaaggatacatttttgaattacgatgaa
ttcaatcacctcctttatagctcaggagtttctgctgctggatcaggttctttaaggaaa
cttgggaaaaaggtggcgattgattttgaagagaatatgctctgtcccgtgcctaccatt
tggaaaccagagcctctttggacaggaaaacagttgattgctacggttctagatcattta
actagaggttacccgccatttaccgtggaaaagcgggggaagataccatctgcctttttt
aaaacaaaacttggcaggaagattgttcgaagtgaaccaggaaaagatgatgcaattaag
cataaacccagcaaaagaaaagggactgacaaggataaagtgaaggaacaggacaagcca
agagatttcattagagataaaatgaaaagaaatgaagagcctggtgaagatactgtgttg
atattcaaaaactacctaatttgcggggtcatcgataaggctcagtttggtgactacggt
ctagtccatacggttcaggagctttatggttcaaatactgcaggaattttgctatcagcg
tttagtcggttatttacagcttttcttcagatgcatggtttcacgtgtggagtggatgat
cttttgctgagtaaagatgtcgatgaaaaaagacaacaacaacttgaagaatgtgaaaga
tgtggagaggaagtgcaccgcgaggttgttggggttaagaacagtgagttcatatactca
gcagaacttcaatggaaaatcgaagaagtaatacgcggcaatggagattcagcactgacc
aatctagataggaggatgattagtaggctaaatgagttgagtagtaaaaagatcgagaag
aatttgctgtctgaagggttattcaagcccactgcgaagaactgcatttcactgatgact
acatctggggccaaagggggtactgcgaatttccagcaaatatcttctcatttgggtcaa
caggagctagaaggcaggcgagtccctagaatggtttctggaaagactttgccctgcttt
cctccttgggattgggcatctagggctggaggctttataattgatcgttttcttactggt
ctgcggcctcaagaatattacttccattgtatggctggccgtgaaggtttagttgataca
gcagtcaaaacatctcgcagtgggtatctgcagagatgcttggtaaaaaatctcgaatgc
ctaaaagtttcttatgatcatactgtccgagatgcggatgggtccatcgtgcaattttat
tatggagaagacggtattgacgtccatcaaacaagctttgtggcaaaatttgatgccctg
ttggctaatcatgacattatgaaggcgaagtattccactgagcttcgcaaatctaatagc
tatatcacagatttgccagctgctctgaaggacaaagcaaataagttcatgtgtgatagg
aatctttcagttcctggattagcaaagaacatgatgttaaagccagaagactttgtgaag
tcagtggaacaaaaatatttctcaagtcttgcacaacctggagaaccagttggcgtagtt
gctgctcagtctgttggagaaccatcaacacagatgacgctgaacacttttcatcatgct
ggtcggggagaaatgaatgtgacacttggaattccacgcctacaggagatattgatgact
gcatccactgatattaagactccgattttgacctgccctttacggagagggaggccaaag
gatgatgccacttctcttgctgaaaaattaaagaaaatcactgtggctgaaaggattgaa
agtatggaagttgcagttgtgccatttgaagtggataatcacaatcgccaggtctacaga
agatataaactgaaaatgaagcttaacaggactaaattctgttcgctagagcactgtgaa
gagatcttaacagtagtataccttagggagttggaggatgcaatacagaatcatgttctt
ctgctctccaaaatcagtgggataaagaattttacatcagattcaagacccaagacatca
agcgagactgatgaagatgcgtctggtttggcttcagagcatgctgaggagaggaactta
gatgatgatgctgatgatgatgacgatgacggtaatgacaatgatgatcttggttttgat
ggtcaaaaacgtaaagaacaagctacagatgaaatgtactatgaggacggttatgaagag
gaacggaatgaactggagctctctgctggattagaaagtgatgctgatcaggctaatgaa
tttgatagtggcaaggatgaagatggaatgcctgggatagcaccagagattgtgagccct
tctaaaacaaagaaaactaagaaaaaagctaagtcgaacaacaaaagaaagaacaggttc
ataccaaaggattttgacagagcaatttttgtggcagcaaatggattggactttgaggtc
catttcagatttactaatgaacctcatattttactggctcagattgctcagaaagtggcg
aaaaaggtatacctcaggagctctggcaagattgaatcttgtcaagtgatttcttgcaaa
gagaatcaagtgatctactatggagaagatcctaaaagaagacagaaaattgaagccgag
gagaaagatgcaattccggcgcttcatacaaacggagcggattttcgtgcattttggcaa
atgcaagatgagctggacattagatatatatattccaatgatatccatgcgatgctcact
acatatggcgtagaagctgcgagagaaaccatcataagggaggtgcagaatgtcttcggt
tcatatggaatttctgtggacatccgtcacctcaccttgattgcagactttatgacccac
acaggtggttatcgtccaatgaacaggctcggtggtatagcagagtccttatcgcctttc
agcaagatgtcctttgagacagcttccaagttcatagttgatgcggcatatcatggggtg
gtcgacaaattggagaccccatccgctcgcatttgcctcgggctacctgtgaagatgggt
accggatcttttgatttattacagaaacttcagttatga
DBGET
integrated database retrieval system
