Rhodamnia argentea (silver malletwood): 115737977
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Entry
115737977 CDS
T10595
Name
(RefSeq) protein RAE1 isoform X1
KO
K14298
mRNA export factor
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115737977
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115737977
03036 Chromosome and associated proteins [BR:
rarg03036
]
115737977
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115737977
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115737977
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_THOC3
WD40_Prp19
Beta-prop_WDR3_1st
Beta-prop_WDR5
WD40
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_RIG_2nd
WD40_Gbeta
Beta-prop_WDR36-Utp21_1st
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_TEP1_C
Beta-prop_SPT8
Beta-prop_HPS5
Beta-prop_ACSF4
Beta-prop_Aladin
Beta-prop_DCAF12
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_EIPR1
Beta-prop_RSE1_2nd
NBCH_WD40
Beta-prop_BBS7
SdiA-regulated
Motif
Other DBs
NCBI-GeneID:
115737977
NCBI-ProteinID:
XP_030526301
UniProt:
A0A8B8NUU3
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All DBs
Position
8:637997..643214
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AA seq
349 aa
AA seq
DB search
MATFGAAPAGNHNPNKSFEVIQPPSDSVSSLSFSPRANHLVATSWDNQVRCWELTRNGAS
VTSVPKASISHDQPVLCSAWKDDGTTVFSGGCDKQAKMWSLMSGGQPVTVAMHDAPIKEI
AWIPEMNVLVTGSWDKTLKYWDTRQSNPVHTQQLPERCRALTVRHPLMVVATADRHLIVF
NLQNPQIEFKRIPSPLKYQTRCVAAFPDQQGFLVGSIEGRVGVHHLDESQSSRNFTFKCH
RDTTEIYSVNSLNFHPVHHTFATAGSDGAFNFWDKDSKQRLKAMSRCSQPIPCSAFNNDG
TLYAYSVCYDWSKGAENHNPATAKTYIFLHLPQESEVKPKPRVGTTNRK
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggccaccttcggagcagctcctgctgggaaccacaaccctaacaagtctttcgaggtg
attcaacctcccagcgattccgtttcgagcctcagtttcagcccaagggccaaccactta
gttgctacttcgtgggataatcaggtgcggtgctgggaacttacgaggaacggggcttcg
gtaactagcgtgcccaaggcatcaatatcacatgaccaaccggtactttgttcagcttgg
aaggatgatggaacgactgtcttttctggaggctgtgataagcaagcaaaaatgtggtct
ttaatgtctggaggtcagccagtgacagttgccatgcacgatgcacccattaaagagatc
gcttggatcccagagatgaatgtattagttacgggaagctgggacaagaccttgaagtac
tgggacacaaggcagtcaaatccagtacatactcaacagctaccagaacgctgccgtgca
cttacagtgagacatcccctgatggttgttgccacggcagataggcatcttattgtcttt
aatctgcagaatcctcagattgagttcaagagaattccttcacccctaaagtaccagaca
agatgtgttgcagctttccctgaccagcaaggtttcctggttggatccatcgaggggagg
gttggtgttcatcacctggatgaatcccagagcagtagaaacttcacttttaagtgtcat
agagataccactgagatttattctgtcaactccttgaatttccatccagtgcatcatacc
tttgccactgctggatctgatggtgcttttaacttttgggacaaggatagcaaacaaaga
cttaaggcaatgtcaagatgcagccaaccaataccttgtagcgccttcaataatgatggc
acattatatgcatactcggtctgttatgactggagcaagggggcagaaaatcacaatcct
gctacagcaaagacctatatcttcttgcacttaccacaggaatcagaggtcaaaccgaag
ccacgggttggaacaactaacaggaagtga
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