Rhodamnia argentea (silver malletwood): 115738055
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Entry
115738055 CDS
T10595
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like isoform X1
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115738055
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rarg01002
]
115738055
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115738055
03036 Chromosome and associated proteins [BR:
rarg03036
]
115738055
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115738055
Peptidases and inhibitors [BR:
rarg01002
]
Metallo peptidases
Family M67
115738055
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
115738055
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
115738055
BRISC complex
115738055
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
115738055
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
115738055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BRCC36_C
JAB
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
115738055
NCBI-ProteinID:
XP_030526401
UniProt:
A0A8B8NV44
LinkDB
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Position
8:complement(964764..970020)
Genome browser
AA seq
431 aa
AA seq
DB search
MSLTSVKMSEEVWLTCLTHALSTETEEIMGLLLGDVERSKNGTSSTALIWGASPQKRSDR
QKDRVETNPEQLAAASALAEEMTMSTGRTTRVIGWYHSHPHITVLPSHVDVRTQAMYQLL
DSGFIGLIFSCFSEDINKVGRIQVIAFQSSDGKQSQISRPIPLSPVNRSSVIDLESSLSS
SENLSARSNSGRLENPEEDTGDSRISAGANKGRGRSSDLGGFFANADTNYLGRAISVENY
GNGNPSSSAIIPIDPMDMTESMQEAMHRSNLDMSGAEYVRKEVPLYVLPSSSLLNLVSPL
TSFTDLQRVIFEEERAAYFEAMRQNVRDGKAHPLTFIHHTSTYQASMCKLIEYCLSPAIR
VLQDRLRENEIRMLKLADEAKSLEMETQRGSDLSSGHRASVYSPRSGPSAPESSNMRSIG
SPGSRSKKWPQ
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgtctctaacgagcgtgaaaatgtcggaggaggtttggttgacatgcctcactcacgca
ttgtccacggagaccgaagagatcatgggcctcctcctcggcgatgtcgagcgctcaaaa
aacgggactagtagcactgcactaatttggggtgcatctcctcaaaaacgatctgatcgg
caaaaagatcgtgttgagacaaatcccgaacagttggctgccgcatcagcattggctgaa
gagatgaccatgtcaacaggaagaacaacaagagtaattggatggtaccattcgcaccct
catataacagttctcccgtcccatgttgatgtgcggacacaggcaatgtatcaactccta
gattctggattcattgggttgatattttcctgctttagcgaggatattaacaaggttggg
agaattcaagtcatagctttccaatcttcagatgggaagcaaagccagatatcaagacct
atccctctatctccggttaatagaagttcagtcatagacttggaatcatctttgagttcc
tcagagaatttgtcggcacgatctaactctgggaggttggagaaccccgaagaggacact
ggcgattccagaatctctgctggagctaataaggggcggggaaggtcatcagatttgggg
ggtttctttgctaacgctgataccaattatctcggaagagcgataagtgttgaaaattat
ggcaatggaaatccaagcagcagcgccataatccctatagatcccatggatatgacagaa
agcatgcaggaagctatgcataggtcaaacttggacatgagtggcgctgagtatgtgagg
aaagaagtacccctctatgtgttacccagctcctctctccttaatcttgtttcacctcta
acttcatttacggacctgcaacgtgtcatatttgaagaggaaagggcagcatattttgaa
gccatgagacaaaatgtgagggatgggaaagcacatccgcttacttttattcatcacacc
tcaacgtatcaggcttccatgtgcaagttaattgaatactgtttaagccctgccattaga
gtacttcaggatcgtttgagagagaacgagattcggatgctgaagctggcggatgaagca
aagagtttggagatggagactcagagagggagtgatttgagttcaggtcaccgggcaagt
gtatatagtccgagaagcgggcctagtgcaccggagtctagcaatatgaggagcatcggt
agtcccggcagtcgaagcaagaaatggccccagtga
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