Rhodamnia argentea (silver malletwood): 115738073
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Entry
115738073 CDS
T10595
Name
(RefSeq) putative tRNA pseudouridine synthase isoform X1
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rarg03016
]
115738073
Enzymes [BR:
rarg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
115738073
Transfer RNA biogenesis [BR:
rarg03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
115738073
Prokaryotic type
115738073
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
115738073
NCBI-ProteinID:
XP_030526431
UniProt:
A0A8B8NV79
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Position
8:complement(910853..915912)
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AA seq
573 aa
AA seq
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MSVCSCRLLHFPWLLLKPSTPTTSAFATPDRNGRIGRLFSCCSTQTVSPSPSSLETCGAP
GISEPLRWQASLKKKVVMRVGYVGTNYRGLQMQRDEHSLSTVEEELETALYKAGGILESN
YGNLHKIAWARSSRTDKGVHSLATTISLKMEIPENAWKGDPYGIHLASHINAYLPEDIRV
FSILPSKRSFDPRRECNIRKYSYLLPAEIIGMRSNCSSSEVDHHISDFNDILRTFEVLFL
FPTFCPLILSSLFFILWLHLFYKRNFNRHPKVPFMWYVSSLQGDHPFHNYTVRSKYRRKF
PLKKSRRDKRSTMEEKPVDAGSASEPEESDEELRENEFAINCTGTDEHAPQGTGLDENLI
DFCQSHRDDLRSLSSDNVVRARWLHEPDQNDRISSSHFRKILRCSCGKLEHLLGSGYVEL
SIWGESFMLHQIRKMVGTAVAVKRDLLPRDILTLSLAKFSRVVLPLAPSEVLILRGNNYV
MRKGPIDFARPEMTALVESEAVLSTVDDFYRSVMLPQVARFLDPSRPPWKEWVERLDEHT
PIPDTQLDKLRAAWESWKETAELRKGAVSVVTR
NT seq
1722 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtgtgttcgtgtcgattgctgcacttcccatggctattgctgaagccttcgact
ccgacaacctcagctttcgcaaccccagatagaaatggacgcatcggaaggctcttctcc
tgctgctccactcagaccgtgtctccttcgccgtcctctctcgaaacttgcggcgcgccg
ggaatatcagagccactgagatggcaagcctctctgaagaagaaggtggtaatgcgggtc
ggttatgtgggcaccaattacagaggtcttcagatgcaacgagatgagcattcattgtcc
actgtagaagaagaattggaaactgctctctacaaggctggtggaattctagagagtaac
tatgggaatctgcataaaattgcctgggccagaagtagccggacagataaaggagttcat
tcactggcaactaccatatcgctcaagatggaaattcctgagaatgcatggaagggagac
ccttatggtatccatctcgccagtcatattaatgcatatcttcctgaagacatcagagtt
tttagcattctcccttcaaaaaggagctttgatccaagacgggagtgcaatatccggaag
tattcgtatcttcttcctgctgaaattattgggatgagaagtaattgttcctccagtgaa
gttgatcatcacatatcagattttaatgatatattgaggacctttgaggttctgttcttg
tttcccactttttgcccccttatcctatcttctttgttctttattttgtggctgcatctg
ttttacaagaggaattttaacagacatccaaaagtcccttttatgtggtatgtgtcctct
ttgcagggggatcatccttttcataactatactgtacgttccaagtacagaagaaagttt
cccttaaagaagtcacggagagacaagcgttcaacaatggaagaaaagccagttgatgca
ggatctgcatctgaaccagaagaaagtgatgaagagcttagggagaatgaatttgcaatt
aattgtacgggaacagatgaacatgctccacagggaactggccttgatgaaaatttaata
gacttttgccaaagtcatagggatgatctaaggagcctaagttcagataatgttgttagg
gcaagatggttacatgaacctgatcagaatgaccgaattagttcttcccattttagaaag
attcttcgttgctcttgtggcaaattggaacatctgcttgggtcaggttatgttgagctc
tccatctggggggagtcttttatgttgcatcagatccgcaaaatggtggggactgctgta
gctgtaaagcgcgacttacttcctagagatattctcacattgtcactggccaaattttcc
cgtgttgtgctaccacttgctccatctgaggtattgatacttagagggaacaattatgtc
atgagaaagggacctattgattttgctaggccagaaatgacggcattagtggagtcagaa
gctgtgttgagcaccgttgacgatttttacagatcagtaatgttgcctcaagttgctaga
tttctggacccttcaagacccccttggaaagaatgggttgagagattggatgagcacact
ccaattccagacacgcagttggacaaactcagggctgcttgggaatcctggaaggaaact
gccgagcttcgaaaaggtgctgtgtctgttgttactcgatga
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