Rhodamnia argentea (silver malletwood): 115738121
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Entry
115738121 CDS
T10595
Name
(RefSeq) nuclear poly(A) polymerase 4-like
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115738121
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115738121
Enzymes [BR:
rarg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
115738121
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
115738121
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
115738121
NCBI-ProteinID:
XP_030526503
UniProt:
A0A8B8NXM8
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Position
8:complement(1749970..1755282)
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AA seq
524 aa
AA seq
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MKQFGITEPMSELGPNEADIQRSRELEKIVKDWVKQVARLHRYSDEMVEDANAVIFTFGP
YRLGVTGPGDDIDTLCVGPSYVNREEDFFIKLHDILAQMEEVTELQPVRDARVPVMKFKY
DGISIDLLYASISLLVVPDELDISQVSVLGDIHSPTVRSLNGCRVAVQILKLVPNVEVTG
FLGRVNWALLVARVCQLYPNAIPSMLVSQFFRVYTQWPWPNPVMLCPIEKDELGFSVWDP
RRNPDDHMPIITPVYPCMNSSSNVSIKTLCVMMEQFKFGNNICQKIELDKAQWSALFEHR
MFFKSYESYLQVDVLAADADDLRSWEGRVQSRLRQLPLMQIERNSNGKLECHLYPHKYVN
TSKQCAHTAFFVGLQRKQGEKVLEGQWFNICGTVDEFRHAISMYKFWKLGMEIYVSHVHR
WQIPSHVFANAYKLLRLTTPTQHEGEKAYSEDAHVCKCGSAEKDIERKKGSRPPSRMHCT
VSPHIFTGNARACLVYKEDEERVDEDEEEDETVVVSIRTVGLGG
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaattcgggattacggaaccgatgtcggagttggggcccaacgaggctgatatt
cagagaagcagggagttggagaagatcgtaaaagattgggtgaagcaagtagctcgtcta
cacaggtactcggatgaaatggtggaggatgcaaatgctgttatttttacttttggtcct
tataggcttggggtcactggccctggtgatgacatagacactttgtgtgttgggccatcc
tatgtgaatcgagaggaggatttcttcatcaaattgcatgacatcctggcacagatggaa
gaagtgacggaactacagccagttcgcgatgctcgtgtccctgtaatgaaatttaagtat
gatgggatatcaatcgaccttctttacgcaagtatttcgctactggttgtgccggatgaa
ttggacatctcccaagtatctgttctaggtgatatccatagccctactgttcgaagtctc
aatgggtgcagggttgcagttcaaattctaaagcttgttccaaatgttgaggtgactgga
tttcttggtcgtgtcaactgggcgttacttgtagctcgtgtgtgccagctttatcccaac
gcaatccctagtatgctagtttcacagtttttcagagtttatacgcagtggccttggccg
aatcctgtcatgttatgcccaattgaaaaggatgaacttggcttttctgtgtgggatcca
cgtagaaatcctgatgatcatatgcctatcataactcctgtatatccttgtatgaattct
agctccaatgtctcgattaaaactctgtgtgttatgatggaacagttcaaatttggcaac
aacatatgtcagaagatagaattggacaaggctcagtggagtgctctatttgagcatcgt
atgttcttcaaaagctatgaaagttatctgcaggtcgatgtacttgctgcagatgcagat
gacttgcgttcttgggaaggcagggtgcaatcaaggcttaggcagttgcctttgatgcag
attgaacggaactcaaatgggaagttggaatgccatctataccctcacaagtatgtcaat
acgtcgaagcaatgtgcacatacggcttttttcgtgggtttgcagaggaaacagggggag
aaagttctggaaggtcagtggttcaacatatgtgggaccgttgatgaatttaggcatgcc
ataagtatgtataagttctggaaactggggatggagatatatgtttctcatgttcacaga
tggcagattccttctcatgtgtttgctaatgcatataagctacttcgacttacaactccg
actcagcatgaaggcgaaaaagcttactcagaagatgctcatgtgtgcaagtgtggatca
gctgagaaagacattgaaaggaagaaaggcagcagacctcccagtcgtatgcattgtaca
gtatcacctcatatttttactggcaacgctagagcttgtctcgtgtataaagaagatgaa
gagagagttgatgaagatgaggaggaggatgagacggtggtggtgtcgattcggaccgtg
ggattgggtggataa
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