Rhodamnia argentea (silver malletwood): 115738177
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Entry
115738177 CDS
T10595
Name
(RefSeq) protein CNGC15b-like
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115738177
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rarg04040
]
115738177
Ion channels [BR:
rarg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115738177
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Gene cluster
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Ion_trans_2
Motif
Other DBs
NCBI-GeneID:
115738177
NCBI-ProteinID:
XP_030526572
UniProt:
A0A8B8NVL6
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Position
8:27229837..27233307
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AA seq
703 aa
AA seq
DB search
MTSVMGYSSARARFGRVGDESFLEEIPRIQEGEISNEDAACHDLGSKTTRLKIGKSLKVK
VLRRVFSEDYDRVKSNIFDPRGQTIQWWNRIFFMACLVSLFVDPLFFLVPSIDSNRMCLE
DASALKIFITIIRSVVDAFYTAQIFVRFKTAYVAPSSRVFGRGELVIDSKKIALRYLSRG
FWIDLFAAIPLPQLLIWAIIPNLAGSMTAQRKNHILFIIFFQYLPRFYLILPLRSEIIDA
SGGITETAWAGAAYNLMLFMLASHVAGACWYLLAMERQEFCWRSVCDQEKPLCRYSFFHC
RHVQDPGRDAWYNLTNLTNLCNPNNADTPIQWGVYSNFVTELVASCKFFSKYFFCFWWGL
NNLSDIGQNLVPATYIGDELFVIVVATIGLVLLALLIGNMQRYVQSTSIRLEQWRIKRIG
TEQWMHHRLLPPELRQSIQKYDQYKWVTTRGVDEEALLRDLPKDLRREINRHICFDLVRR
VPLFNQMDERTLDAICERLKPILCTQDMFLVCQGDPIRDMFFIVRGHLNSWATNGGGTGI
NSCCLGPSDFCGEELLTWALDPRRSIVLPSSTRTVKAVKEVEAFSLAAEDLKFVAMQFRS
LHSKKLRHKFRFYSHQWRTWAASFIQSAWRRHKKLKEETKSSEPMAGLAGSNGKLKPSRS
FWDVYAKELIESTRRDENNQAGSASDAVNTVQKPVDLDFSVDY
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtgtgatgggctatagcagtgcaagggcgagattcggaagagtaggagacgaa
tcctttttggaagaaatcccaagaattcaggaaggcgagatatcaaatgaggacgctgcg
tgccatgacttgggctcaaaaactaccagactaaagattggaaaatccttgaaagtgaag
gttttgcgcagagtattctccgaggactatgatagggtgaagagcaatatcttcgatccg
agaggccaaaccattcaatggtggaacagaatcttttttatggcttgcttggtgtcccta
tttgtggacccccttttcttcttagtgccatctattgacagcaacagaatgtgcttagaa
gatgcatcggccctcaagattttcataacgatcataagatcggtggttgatgccttctac
acagctcagattttcgtgcggttcaaaacagcttatgtcgcaccctcgtcccgggttttc
gggaggggagaactggttatagactcgaaaaagatcgcgttaaggtacttgtccagaggc
ttttggatcgatctctttgcggcaatcccccttcctcagctgttaatttgggcgataatt
cctaaccttgcgggctcaatgacggctcaaaggaagaaccacatcctgttcattatcttc
ttccagtacctgccaaggttctatcttatacttccactccggtcggagatcattgatgct
agcggcggaataacagagaccgcatgggcaggggctgcatacaacttgatgctcttcatg
ttggcaagccatgttgctggagcttgctggtatctgctagcgatggagcgacaagagttt
tgctggagaagtgtctgtgatcaggaaaaaccgctgtgcaggtacagtttcttccattgt
cgccatgttcaagacccaggaagggatgcctggtataatttgaccaacttaacaaatctg
tgtaaccccaacaatgctgacactccgattcaatggggtgtgtactctaattttgtgact
gaattggtcgcgagctgcaaattcttcagcaagtacttcttctgtttctggtggggtctg
aacaacttgagcgatatagggcaaaaccttgtgccagccacttatattggagacgaactt
ttcgttatcgtggttgcgactattggactagttttgttagcactgctcattggaaatatg
caacgatacgtccaatctacgagcatccggttagagcaatggaggatcaagagaataggc
acagaacagtggatgcatcatagacttctacctccagagctgcgacaatctattcagaag
tatgaccaatataagtgggtgacaactcgaggtgttgatgaagaagcccttctccgagac
ctcccaaaggacctgcgcagagagatcaatcgccatatctgctttgatctagttcgacgt
gtgccactgttcaatcaaatggatgagaggacgctagatgcgatatgcgagaggctgaag
cccatcttgtgcacacaagacatgttcttagtatgccaaggtgatccaattcgagacatg
ttcttcatagtccggggccacctcaattcctgggcgaccaacgggggcggcacaggtatt
aactcatgctgtctggggcccagtgacttctgtggtgaggaactcctaacatgggccctg
gacccgcggcgaagtatcgtcctgccctcgtccacgcgcacagtcaaggcagtgaaagaa
gtggaagcattctctcttgcagctgaggacttaaagttcgtggcaatgcaattcagaagc
ctacatagcaaaaaactgaggcacaagttcaggttctactcgcaccagtggcgcacatgg
gctgcaagtttcattcaatccgcatggcgccgtcataagaagttgaaggaggaaaccaag
tcgagtgaacccatggctggtctggcgggttcaaatgggaaattgaaaccttcgaggtca
ttctgggatgtatatgcaaaggagctgatagagagcaccagaagggatgagaataatcaa
gctgggtcggcttctgatgcggtgaatacagtgcaaaagccagtggacctggatttttcg
gtagattactag
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