Rhodamnia argentea (silver malletwood): 115738238
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Entry
115738238 CDS
T10595
Name
(RefSeq) ABC transporter F family member 1
KO
K06185
ATP-binding cassette, subfamily F, member 2
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rarg03009
]
115738238
Ribosome biogenesis [BR:
rarg03009
]
Eukaryotic type
Pre-60S particles
Export and cytoplasmic maturation factors
115738238
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Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
MMR_HSR1
AAA_28
RsgA_GTPase
AAA_24
AAA_22
AAA_15
Ig_F54D1_6_2
Motif
Other DBs
NCBI-GeneID:
115738238
NCBI-ProteinID:
XP_030526670
UniProt:
A0A8B8NVV4
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Position
8:27110718..27115029
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AA seq
605 aa
AA seq
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MVSDASKKKAAQKKAAAAAKRGGKAAAAGASSKAAAAAASAAAETQNGADKLADGVGNMV
ISDRTCTGVLCSHPLSRDIRIESLSLTFHGHDLIVDSELELNYGRRYGLLGLNGCGKSTL
LAAVGCRELPIPDHMDIFHLTREIEASDMSSLEAVISCDEERLQLEKEAEALAAQDDGGG
EALDRIYERLEAMDAATAEKRAAEILFGLGFDKKMQAKKTRDFSGGWRMRIALARALFMN
PTILLLDEPTNHLDLEACVWLEETLKNFERILVVVSHSQDFLNGVCTNIIHMQNKKLKIY
SGNYDQYVQTRSELEENQMKQYKWEQEQIASMKEYIARFGHGSAKLARQAQSKEKTLAKM
ERGGLTEKVARDKVLVFRFVDVGKLPPPVLQFVEVTFGYTPDNLLYKNLDFGVDLDSRVA
LVGPNGAGKSTLLKLMTGDLVPLDGMVRRHNHLRIAQFHQHLTEKLDMELSALQFMIKEY
PGNEEEKMRASIGKFGLTGKAQVMAMKNLSDGQRSRVIFAWLAFRQPHMLLLDEPTNHLD
IETIDSLAEALNEWDGGLVLVSHDFRLINQVAHEIWVCENQAVTRWEGDIMDFKMHLRSK
AGLSD
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atggtgtccgacgcgagcaagaagaaggctgctcagaagaaggcggcggctgcggccaag
agaggaggaaaagctgcggctgcgggggcatcgtcaaaggcggcggcggcggcagcgtct
gctgctgccgagacgcagaatggagccgataagttggccgatggcgtcgggaatatggtt
atttcggatcggacttgtaccggagtgctctgctcgcatcctctctccagggatattcgt
atagagtctctctcacttacatttcatggacatgatcttattgttgattctgagctggag
cttaactatggcaggcgatacggcttgcttggattaaatggatgtgggaaatccacactc
ctagctgcagttggttgcagagagcttccaataccagaccacatggatatatttcattta
actagagaaattgaagcttcagacatgtcttcactcgaggccgtcattagctgtgatgag
gagagattgcaattagaaaaagaagctgaagccttggcagcacaggatgatggtggtgga
gaagctctggatcgtatttatgagcgcttggaagctatggatgcagcgactgcagagaaa
cgtgctgctgagatattgtttggtcttggctttgataagaagatgcaggcgaagaagact
cgagatttctctggtggctggagaatgaggattgcattagcacgagctctctttatgaat
cctactatactgttgcttgatgaaccaacgaaccaccttgatctggaggcttgtgtctgg
cttgaggagacattgaagaattttgagaggatccttgttgtcgtatctcattcacaggat
tttctgaacggtgtttgtacgaacatcattcacatgcaaaataagaaattgaagatctat
agtggcaattatgatcagtatgttcagacccgttcggaactggaagaaaatcagatgaaa
cagtacaagtgggaacaggagcagattgcttccatgaaggaatacattgcccgctttggg
catgggtctgcaaaattggcccgtcaggcccagagcaaagaaaagactctagccaagatg
gagcgtggtgggcttactgaaaaggttgcgagggacaaggtcctggttttccgctttgtt
gatgttgggaagcttcccccaccagtgctccagtttgtagaagtaacctttggttataca
cctgataatctactctataagaatcttgattttggggttgacttggactctagagttgct
ctggtgggacccaatggagcaggaaagagcacgttgctgaagctaatgacaggggacttg
gtacctctagatggcatggtccggcgacataatcatttaaggattgcacagttccaccaa
cacctgactgagaaactcgacatggagttgtcggcactccagttcatgatcaaagagtac
cctgggaatgaggaggagaagatgagggcgtcaattggcaagtttggtctgaccggcaag
gcccaggtgatggccatgaagaacttgtccgatggtcaaagaagccgagtgatctttgca
tggttggcatttaggcagcctcacatgcttttgctggatgaaccgactaaccatctggac
atcgaaacaatcgactctcttgctgaggcattgaatgagtgggacgggggcttggtgctg
gtgagtcacgatttcaggctcataaaccaggtggctcatgagatttgggtgtgcgaaaat
caagcagtgactcgatgggagggtgatattatggacttcaagatgcatctgaggagtaag
gctggcttatcggactga
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