Rhodamnia argentea (silver malletwood): 115738927
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Entry
115738927 CDS
T10595
Name
(RefSeq) regulation of nuclear pre-mRNA domain-containing protein 1B
KO
K15559
regulator of Ty1 transposition protein 103
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rarg03021
]
115738927
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115738927
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
ALIX_LYPXL_bnd
CTK3
Helitron_like_N
Motif
Other DBs
NCBI-GeneID:
115738927
NCBI-ProteinID:
XP_030527599
UniProt:
A0A8B8NYH2
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Position
1:complement(33098040..33107945)
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AA seq
524 aa
AA seq
DB search
MGSTFNPQILVEKLAKLNSSQTSIETLSHWCIFHMNKAKQVVETWDRQFHCSPREQRVAF
LYLANDILQNSRRKGSDFVGEFWKVLPEALRDVIENGDDFGKTAALRLINIWEERKVFGS
RGQILKEEFGGRHLENRDRNGKDLGHKPKQPVGNILDKIVSDYQHLYSDQVDEDVVLSKY
RNAISCFEKVEKEIGSDSSSGGSHDTAIVEEVQGQYTVLRNCIDQLTTVESSRARLVSHL
REALQEQEIKLDRVRNELQAAQSKSEQANTICRQLLGSNASQLLANQSLKDIQTSIAPQT
YIPADREQSVPVMYSQRAPSYPEQPGHTEEDPRKSAAAAVAAKLTASTSSAEMLSMVLSS
LASEGVIGNPVKDSSGDHASEKRPRLENNQTPYIPSQNPEQPTIRPFPHPESLQHDGTSG
VQQHPLPPSSAPPLPPPLPPMASYPAPPPFMQAAGPMNTGMPFNYSMSQQPHSLPGYPVV
GTTVSGGLPPFPIAPASSYQGFPGSEGGFYNQPTSLPTAPMSRQ
NT seq
1575 nt
NT seq
+upstream
nt +downstream
nt
atgggcagtaccttcaatccacagattttagttgaaaagttagcaaagctcaacagttca
cagacaagcatagagactttgtcacattggtgtattttccatatgaacaaggcaaaacaa
gttgtcgaaacatgggataggcagtttcactgctcgcctagggaacaacgtgtggctttt
ctatatcttgccaatgatattttgcaaaatagtaggcgaaagggttctgactttgtcggt
gagttctggaaggttcttccggaggcccttcgtgatgtaattgaaaatggggatgatttc
ggaaaaactgctgccctgcgattgattaacatatgggaagagaggaaagtctttggttca
aggggccagattcttaaggaagaatttggcgggagacacctggagaaccgtgacaggaat
gggaaggatttaggacataagccgaaacagcctgttggaaatatcctggacaaaatagtg
tcagattatcaacatctttatagtgaccaagttgatgaagatgtcgtattgagcaaatat
aggaatgctatcagctgttttgagaaagtggaaaaggagattggcagtgacagcagttca
gggggatcccatgacactgcaatcgtggaggaggtgcagggacagtatactgtactgagg
aactgcattgatcaattaaccacagttgaatcctcgagagcaaggctcgtgtctcatctt
agggaggctcttcaggagcaggaaatcaagttggacagagtccgcaatgaacttcaggct
gctcaatcaaagtcagagcaggcgaacactatctgccgacagttacttggtagcaatgct
agtcaattgctggccaaccaaagcttgaaagatatccagacgtccatagcacctcagacg
tacataccagcagacagggaacaatctgtcccagtaatgtactcgcagcgggcaccatct
tatcctgagcagcctggccacactgaagaagaccctcggaagtctgctgctgctgccgtg
gctgcaaagctgacagcatcgacatcatcagctgaaatgctgtctatggtcctttcctcg
ctggcatctgagggtgtcattggtaatcccgtgaaggactcttctggtgatcatgcttcc
gaaaagcgtcctaggctcgagaacaaccaaacaccttacataccatctcaaaatcccgag
cagccaactatccgtccttttccccatccagagtccctccaacacgatggcacaagcggt
gtgcaacagcatccgcttcctccttcatctgctccacctcttccgccaccactcccaccc
atggcttcatacccagcaccgcctccgttcatgcaagctgccggaccaatgaatactggc
atgccattcaactatagcatgagccagcagccgcattcactgccaggttatccagtagtt
gggacgacagtgtctggtggattaccgccattccctatagctccagcaagctcctatcag
ggtttccccggttcagaaggtggtttctacaaccagccaacgtccctgccaacggcacca
atgtctcggcaatag
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