Rhodamnia argentea (silver malletwood): 115739071
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Entry
115739071 CDS
T10595
Name
(RefSeq) polygalacturonase
KO
K01184
polygalacturonase [EC:
3.2.1.15
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00040
Pentose and glucuronate interconversions
rarg01100
Metabolic pathways
Module
rarg_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
115739071
Enzymes [BR:
rarg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.15 endo-polygalacturonase
115739071
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Motif
Pfam:
Glyco_hydro_28
Pect-lyase_RHGA_epim
EGF_Mua-3
Nab2-zf4
Motif
Other DBs
NCBI-GeneID:
115739071
NCBI-ProteinID:
XP_030527795
UniProt:
A0A8B8NZ05
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Position
10:complement(8690301..8692171)
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AA seq
402 aa
AA seq
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MAKSFLMINSSMNNSSWLLLVLFFFIVASSLKGSEAAVYNVLSYGAKPDGRADSTLAFQR
AWLSACGSAMPATVYVPRGNFMLRPVVFSGPCKARIVFQVAGTLIAPSNYWSLGNSGYWI
LFIKVTGVRVYGGTLNAQGSGYWACKSSGKSCPGGARSISFQWSSNVVISGITSVNSQMF
HIVIDNCVNVLVRNVKIRAPAQSPNTDGIHIRSSTGVTIASSSIMTGDDCISIGPGSKNI
WIQRIVCGPGHGISVGSLGEDANEDGVQNVTVTGAVFKGTQNGVRIKSWGRPSNGFARTI
SFRNILMKNVFNPIIIDQNYCPDNSNCPNQNSGVKISRVTYKNIRGTSATPVAMNFACSP
TNPCWGIALQNIELTYLTTQATSYCKNAGGSSSGIVVPRSCF
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagtcgttcctcatgattaacagctccatgaataatagttcatggcttctctta
gtgttattctttttcattgtggcttcatctctaaaaggatcggaagcggcagtgtataat
gtgctgagctacggggcgaagcccgatgggagggccgactcgaccctagcattccaaaga
gcatggttgtcggcatgtgggtcggccatgccggccacggtctatgtcccgcggggaaac
ttcatgctgaggccggtggtgttcagcggaccgtgcaaggctaggatcgtgtttcaggtc
gcggggaccctgatagctccatcaaattactggagcttggggaattcagggtattggata
ttgttcatcaaggttacaggggttagggtttatggagggactctcaatgcacaaggttct
ggttactgggcttgcaagagctctggcaagagttgccctgggggagctaggtcgatatcg
ttccagtggtcgagcaatgtcgtgatcagtggcataacgtctgtgaacagccaaatgttt
cacatcgtgattgacaactgcgtgaatgtgttggtccggaacgtgaagataagagcgccg
gcacagagccccaacaccgatggcatccacatccgttcttccaccggagtaaccattgcc
tcctcctccatcatgaccggtgacgactgcatctccatcggtccaggatccaagaacatc
tggatccagcgtatcgtctgtggccccgggcacggcatcagtgttggaagtctgggagag
gatgcgaatgaagatggagttcagaatgtgacagtgacaggtgcggttttcaaaggtact
cagaatggagtgcggatcaaatcttggggaaggccaagcaatggatttgctagaaccatt
tctttcaggaacatcctcatgaagaatgtgttcaatcctatcatcatagaccagaattac
tgtccagacaactcaaattgccctaatcagaattcaggagtgaagattagccgagttacc
tacaagaacatcaggggaacatcggccacgccagttgcgatgaatttcgcttgcagcccg
acgaatccgtgctggggcatagcattacagaacatagaactcacgtatcttactacacaa
gccacttcttactgtaagaatgctggaggcagcagcagtggaattgttgtaccgagaagc
tgtttctga
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