Rhodamnia argentea (silver malletwood): 115739145
Help
Entry
115739145 CDS
T10595
Name
(RefSeq) exosome complex component RRP43
KO
K12586
exosome complex component RRP43
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115739145
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115739145
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
115739145
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
115739145
NCBI-ProteinID:
XP_048127695
UniProt:
A0A8B8NZG9
LinkDB
All DBs
Position
10:9670368..9675208
Genome browser
AA seq
303 aa
AA seq
DB search
MGAPNAAGDWSSEMEVDAFRRLFPLCYFERHLSESIRPDARPLKRARDTIVSLGAVASSD
GSALAKIGSTTMLAAIKMEVMTPSVDSPDEGSIAVEFHMPPICSPVVRPGRPAEVAPVIS
KQLFDSLLSSGMIDLKELSLVKGKAAWMAYLDIYCLDADGALFDAALLSAVAAFSHLRIP
VVSLNDEGRVVVVSKELEGEKLVKEPVNEERRKLSLNSIPFSLTCILHKNYILADPTFEE
ESIMETFITVVLNSSGQLVSLYKPGGPVLAHTSAIQECIALTKHRMKELQEIIDEAISIM
EVD
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgggggcgccaaatgctgctggagattggtcgtcggagatggaggtcgatgctttcaga
cgcctcttccctctttgctactttgagcggcatctctccgaatctatacgccccgatgcc
agacccctcaaaagagccagagatacaattgtgtccctcggggctgttgcatcctctgat
gggtctgcgctggcaaagatcggttccactacaatgttggctgctataaaaatggaagtc
atgactccttctgttgattcgcctgatgaaggcagtatagcggttgagtttcatatgccc
cctatatgctctccagttgtgaggccaggtaggcctgctgaagtagcacctgtgatatcg
aagcaactttttgactctttattaagctctgggatgattgatttaaaggagctatccctg
gtcaaaggaaaagcagcttggatggcttacctggatatatattgtcttgatgctgatgga
gctctttttgatgctgcattgctttcagcagttgctgcattttctcatttgcgtatcccg
gtggtttctttgaatgatgaagggagagtggtggtggtctctaaggaacttgagggtgaa
aagttggttaaagaacctgtcaatgaagagaggagaaaactctcgttgaacagcattcca
ttttccctgacatgcattcttcacaagaactacatcttggcggaccctactttcgaagaa
gagtccataatggaaacgttcataactgtggttttgaattcatctggtcaacttgtctct
ctctataagccaggtggaccggttcttgcacatacatcggctattcaggaatgcattgca
ttgacaaagcatagaatgaaggaacttcaggagattatagatgaagccatttccataatg
gaggttgactag
DBGET
integrated database retrieval system
