Rhodamnia argentea (silver malletwood): 115739425
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Entry
115739425 CDS
T10595
Name
(RefSeq) rhamnogalacturonate lyase B isoform X1
KO
K18195
rhamnogalacturonan endolyase [EC:
4.2.2.23
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
115739425
Enzymes [BR:
rarg01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.23 rhamnogalacturonan endolyase
115739425
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GFIT
Motif
Pfam:
Rhamnogal_lyase
CBM-like
fn3_3
Motif
Other DBs
NCBI-GeneID:
115739425
NCBI-ProteinID:
XP_030528372
UniProt:
A0A8B8P0L2
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Position
11:complement(4654674..4660062)
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AA seq
681 aa
AA seq
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MGYWRPQWRLLDCSGRQGRGAAVVHLLLWCCIVVSETTQNSPGSSKSKSSLGVQLKLQDR
GQMLIDNGLLQVILSIPDGDVIGIWYNGIDNLLEIQNEENNRGYWDVVWNWPGEPIKYDR
IQGTTYKIVTQNDDQVEISFVRKWSVSANQTVVPLNIDKRYIVRRGCSGFYNYAIFERPE
GLRDIEMDQVRIVYKLQNAKFHFMALSDARQRDMPMPEDRITGQPLAYPEAVLLTDPINP
ELRGEVDDKYQYSCENQYNRVHGWICGDPPVGFWMITPSNEFRTAGPIKQDLTSHVGPIT
LSMFVSTHYAGKEVGMKFRDGEPWKKVFGPVLVYLNSVLPEEDLGNLWQNAKEQMYVESD
TWPYSFTESEDFPSSEERGMVVGQLLVRDRYITEKYLWGGFAYVGLASPGEVGSWQRENK
GYQFWCRADRKGNFIINNIRAGDYNLYGWVPGIIGDYKYEGNVTITPGSAINLGILVYRP
PRHGPTLWEIGVPDRTASEFYVPEPYPTLMNNLYSKNNQYRFRQYGLWERYADLYPRDDL
VFHVGVDDHRKDWFFAQVTRNLYNYTFTATTWQIVFELETVKETAGYVLQLALASVTESD
LQVRFNDPSIEAPHFATGRIGQDNAIARHGIHGLYWLYSIPVLSSRLRSGNNIIFLTQAL
AINPYQGVMYDYIRLEGPPEL
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgggctactggcggccgcagtggaggttgctcgactgcagcggacggcagggtagagga
gcggcggtggttcatttgctgctgtggtgctgcattgtcgtttctgagacgacccaaaat
tctccagggagcagcaaatccaagtcttctcttggggtccagctgaagttgcaggaccgg
gggcagatgttgatagacaacgggcttctccaagtaattttgtcgattccggatggagat
gtcataggcatttggtataatggtatcgataacttgcttgaaatccagaatgaagaaaac
aacagagggtactgggatgttgtttggaactggcctggagagccgatcaaatacgacagg
atacaaggaacaacgtacaagatcgtaactcagaatgacgaccaagtagagatatcgttc
gtcagaaaatggagtgtctcggccaaccagactgtggttccgctgaacatcgacaagagg
tacatagtgcggcgtggatgctcgggattttacaattacgccattttcgagcgcccggaa
ggattgcgggacatcgaaatggaccaagtcaggatcgtttacaagctccagaatgcaaag
tttcatttcatggctttgtcggatgctaggcagagagacatgccgatgccagaggaccgg
atcacgggccagccgctggcctacccggaagcagttctactgaccgatccaattaacccg
gaacttagaggagaggtggacgacaagtaccagtactcatgcgagaaccagtacaacaga
gtgcacggatggatctgcggggatccgccggtgggcttctggatgatcacgcccagtaac
gagttccgcaccgctgggcccatcaagcaggacctcacttcccacgtcggcccaatcacc
ctctccatgtttgtgagcactcactatgctgggaaagaagtgggcatgaagttcagagat
ggagagccttggaagaaggtgtttggccctgttctggtctatctcaactctgttttacca
gaggaagacttgggcaatctctggcaaaatgccaaagagcagatgtacgtagagtcggac
acctggccgtacagtttcacagagtcggaggatttcccttcgtcggaggagcgaggaatg
gtcgttggccagttacttgttcgcgacagatatataactgagaaatacttgtggggaggc
tttgcctatgttggcctagcatcgcctggtgaggtcgggtcgtggcaaagggagaacaag
ggttatcagttttggtgtagagcagacagaaagggaaatttcataatcaacaacattcga
gccggcgattacaacttatatggatgggttcctggtattataggagactacaagtatgaa
ggcaatgtcactatcacaccaggttccgcaatcaacttggggattcttgtctacaggccg
ccgagacacggccctactctgtgggaaataggcgtccctgaccgcacggcttcggagttc
tacgtgcccgaaccttacccaaccctcatgaataatctgtactctaagaacaaccaatac
agatttaggcaatacggtttgtgggagcgatatgcagacttatacccccgagatgatctc
gtctttcatgtgggcgttgatgatcatcgtaaagattggttctttgcccaggtcactcgg
aatttgtataactacacattcacagcgacgacatggcagattgtgtttgaactcgagaca
gtgaaagagaccgccggttacgtcctccaattggccttggcatcagttactgaatctgac
ttgcaggtacggttcaacgacccgagcattgaggccccgcacttcgccacagggagaatc
ggacaggacaatgcgatagcgagacatggcattcatgggttatactggttgtacagcatt
ccggtgctgagctcgcgacttcggagcggaaacaacatcatctttttgactcaggccttg
gccataaacccttatcaaggagtcatgtacgattacattcgcctcgaagggcctccggag
ttgtga
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