Rhodamnia argentea (silver malletwood): 115740484
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Entry
115740484 CDS
T10595
Name
(RefSeq) ERAD-associated E3 ubiquitin-protein ligase HRD1B-like
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04120
Ubiquitin mediated proteolysis
rarg04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115740484
04120 Ubiquitin mediated proteolysis
115740484
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115740484
Enzymes [BR:
rarg01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115740484
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115740484
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-rbx1
zf-C3HC4
zf-RING_UBOX
zf-C3HC4_2
zf-C3HC4_3
zf-ANAPC11
zf-RING_5
zf-RING_11
zf-RING_Vps41
zf-RING_16
zf-C3HC4_4
zf-HC5HC2H
DUF5320
U-box_ZFPL1
Prok-RING_4
zf-RING-like
Motif
Other DBs
NCBI-GeneID:
115740484
NCBI-ProteinID:
XP_030529835
UniProt:
A0A8B8P7F4
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All DBs
Position
7:165233..184149
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AA seq
540 aa
AA seq
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MMRLQTYAGLSIIASLAVIYHAFSSRGQFYPAMVYLSTSKISLVLLLNMGLVFMCILWQL
TKRLFLGSLREAEVERLNEQSWREVMEILFAITIFRQDFSVTFLAMVTALLLIKALHWLA
QKRVEYIETTPSVPMLSHIRIVSFIGFLLLVDSLFFYSSMKFLIQMRQASVSLFFAFEYM
ILATTTVSTFVKYVFYISDMLMEGQWENKAVYTFYLELIHDLLHLSMYLCFFLVIFMNYG
VPLHLIRELYETFRKFKIRVADYIRYRKITSNMNDRFPDATPEELNASDATCIICREEMT
TAKKLNCGHLFHVHCLRSWLERQHTCPTCRALVAPPESGTAAAGGQHAQLSDSRQQGAAS
TSTSSQGSSDVGLAGNNLSGHQARIQAAAAAASIYEKSFVYPSTNALVWSSGYAYLPQQN
VPSPSHSSAGDSGPQQFTGHGDPGNMSASQFPSIVYVPVPAPAATGDRIQGVHDNLSQAH
LEAQKKFLQQQIEALQKQLQLLRETHVEGNMSSGTPASGDSKGKAAVSSSFPVSDRDSSC
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atgatgaggttgcaaacgtacgctgggcttagtataatcgcgtcactggcagtgatttat
catgcgttcagcagtcgaggccagttctacccagctatggtttatctatccacttccaaa
atcagtttggtgttgcttcttaacatgggtctggtctttatgtgcatcttgtggcaattg
acgaagcggttgttccttggttccctacgggaagctgaggtagagagacttaatgagcaa
tcatggagagaggtcatggaaatcctctttgctatcactattttcaggcaggatttttcg
gttaccttcttggctatggttactgccttgttgttgatcaaagctttacactggttggct
cagaagagggttgagtacattgagacaaccccttctgttcccatgctatctcacatcagg
atagtttcttttattggatttctgcttctcgtggacagtctctttttctacagctctatg
aagttcctcatacagatgcggcaggcttccgtttcccttttctttgcatttgagtacatg
atactggccacaacaactgtgtcgacttttgttaagtatgttttctacattagcgacatg
cttatggagggccagtgggaaaacaaggctgtttacaccttttacttggaactaatacat
gacctgctacacttgtcgatgtatctgtgcttctttcttgtgatattcatgaattatggt
gtacctctgcacttgattcgggagctttatgagacatttagaaaattcaaaattcgcgtt
gctgattacattcgataccgaaagatcacttcaaatatgaatgatcgatttccagatgct
acacctgaagagcttaatgcaagtgatgcaacatgcattatatgtcgagaagagatgact
acagcgaagaaattaaattgtggacaccttttccatgtacattgccttcgttcatggctc
gagcgacagcatacgtgtcctacttgtagggccctagttgcaccaccagaaagtgggaca
gctgctgctggtggacaacatgcacaactgtcggattctcggcaacaaggggctgcttcc
acaagcacctcatctcagggctcaagtgatgttggtttggctggtaacaatttaagtggg
catcaggccagaatccaagctgctgcagctgctgcatcaatatatgagaagtcttttgtt
tacccttcgacaaacgcattagtatggtcatcagggtatgcctaccttcctcagcaaaat
gtgccatcccctagtcactctagcgccggcgacagtggtccacagcaatttacaggccat
ggtgatcctggaaatatgtctgcctcacaattccctagcattgtttatgtcccagttcca
gctcctgcagccactggagacaggattcagggagttcatgataacttatcacaggcccat
ttggaagctcagaaaaagtttctgcaacagcagattgaggcgctgcaaaagcaacttcaa
ttgctgcgggagacgcacgtcgaagggaacatgtcttcaggtaccccggcatcgggagat
agcaaagggaaggctgccgtgagctcctcgttccctgtttcagacagagactcgtcatgc
tga
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