Rhodamnia argentea (silver malletwood): 115740700
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Entry
115740700 CDS
T10595
Name
(RefSeq) protein CTR9 homolog
KO
K15176
RNA polymerase-associated protein CTR9
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rarg03021
]
115740700
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
115740700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_16
TPR_12
TPR_19
TPR_14
TPR_17
TPR_CcmH_CycH
TPR_11
TPR_6
TPR_9
TPR_7
ARM_TT21_5th
TPR_Slam
ARM_TT21_C
TPR_10
Fis1_TPR_C
NatA_aux_su
HAT_PRP39_C
Motif
Other DBs
NCBI-GeneID:
115740700
NCBI-ProteinID:
XP_030530120
UniProt:
A0A8B8P5J4
LinkDB
All DBs
Position
4:complement(22070166..22081682)
Genome browser
AA seq
1087 aa
AA seq
DB search
MACVYIPVQNSEEEVRVALDQLPRDASDILDILKAEQAPLDLWLVIAREYFKQGKIDQFR
QILEEGSSPEIDEYYADVRYERIAILNALGAYYSYLGKIETKQREKEEHFILATQYYNKA
SRIDMHEPSTWVGKGQLLLAKGEVEQAFAAFKIVLDGDRDNVPALLGQACVEFNRGRYSD
SLELYKRALQVHPDCPGAVRLGIGLCRYKLGQLEKARQAFQRVLQLDPENVEALVALAIM
DMRTNKAGGIRRGVEKMHRAFEIYPYCAMALNYLANHFFFTGQHFLVEQLTETALAVTNH
GPTKSHSYYNLARSYHSKGDYEKAGLYYMASVKEINKPHAFIFPYYGLGQVQLKLGDFRS
SLSNFEKVLEVYPDNCETLRVLGHIYVQLGQMEKGQEFMRKATKVDPRDAQAFLDLGELL
ISSDTGAALDAFKTARGLLKRGGLEVPVELLNNIGVIHFERGELELAEQSLKEAVGDGIW
RSFIEGKVNVGAADATACNRIYKDVQIFTQLEADNVNLELPWNKVTALFNLARLLEQLHK
MEIASILYRLIIYKYPDYIDAYLRLAAISKARNNIQLSIELVNDALKVNEKCPNALSMLG
ELELKNDDWVKAKETFRAASEAADGKDSYSTLSLGNWNYFAAMRNEKRAPKLEATHLEKA
KELYTKVLVQHNSNLYAANGAGVVLAEKGQFDVSKDMFTQVQEAASGSIFIQLPDVWINI
AHVYFAQGNFPLAVKMYQNCLRKFYHDTDSHILLYLARTHYEAEQWQDCKKTLLRAIHLS
PANYVLRFDAGVAMQKFSASTLQKSKRTADEVRSAVAELENAVRVFSQMAAGANLHYHGF
DEKKIDTHVGYCKHLLEAAKVHCEAAQREEEQARQRQELARQLALAEEARRKAEEQRKKQ
LEKRKLEDEQKRVQQQEEHFRRVKEQWKSSTSASKRRERSDADDEEGGHSEKRRRKGGKR
RRKERSSKSQYEMEEAEVDDQEYEDAPLNYGEPADQMHDQDDNAEENAQDVLAAAGLEDS
DAEDEGVPPPNASRRRKAWSESDEEEEERRPESSPVRENSAELQESDGEFGADNEKPNQD
EAVEDED
NT seq
3264 nt
NT seq
+upstream
nt +downstream
nt
atggcgtgcgtgtacatacccgtgcagaactcggaggaggaggtccgggtggccctcgac
cagctcccccgggacgcttccgacatcctcgacatcctcaaggccgagcaagcgccgctc
gatctctggctagtcatcgcgagagagtactttaagcaagggaagatcgaccagtttcga
caaattctggaagaaggctcaagtcccgagattgatgagtattatgctgatgtgaggtat
gagaggatagcgattctcaatgctttgggggcttattacagctacctcgggaaaattgag
accaaacagagagaaaaggaggaacattttattttagcgacccagtactacaataaggca
tcgagaatcgatatgcacgagccttcaacttgggttggaaaaggtcaactcttacttgcc
aaaggcgaagtagaacaggcatttgctgcatttaagattgtgctagatggagatcgggat
aacgttcctgctcttcttggtcaggcatgtgtcgagttcaatcgtggacggtattctgat
tccttggagttgtataagagggcgttgcaagtccaccctgattgtcctggagctgtaaga
cttggcataggtctctgtcgctataagttgggccaattagagaaagctaggcaggcattt
caacgggttctgcagttagacccggaaaatgttgaggcccttgttgcacttgcaattatg
gatatgcgtacaaacaaagcgggtggaattaggagaggagtggaaaagatgcacagggcg
ttcgagatatacccttactgtgcaatggcattgaattatctagcaaaccacttcttcttc
accgggcaacactttttggttgagcaattgacagagactgcccttgcagtgaccaatcat
gggccaacaaagtcacattcttattataatctagcaagatcttaccacagcaagggggac
tacgaaaaagcaggtctctactatatggcttctgtcaaggaaatcaacaagccacatgca
tttatttttccttattatggtcttggtcaagtacaactcaagttgggagatttcagaagt
tctttgtcaaattttgaaaaggttttggaggtatatcctgataattgtgagacattaaga
gttcttgggcacatatatgtgcaactcgggcagatggaaaagggacaggagtttatgagg
aaggcaacaaaggttgatccacgtgatgcccaggcatttcttgatctgggagaattgttg
atatcatctgacactggcgctgctttagatgccttcaagacagctcgtggtctactgaaa
aggggtggcctagaagtgccggtagagttgctcaataatattggagttatccactttgaa
aggggagagcttgagcttgctgaacaaagtctcaaggaggcagttggtgatggcatatgg
cgttctttcattgagggaaaagtgaatgtcggcgctgctgatgctactgcatgcaatcgt
atttacaaggatgtgcaaatatttacacaacttgaagcagataatgtaaacctagaattg
ccttggaataaagtgacagcacttttcaatctggcaagattactggagcagctgcacaaa
atggaaattgcaagtatattatatagattgataatatacaagtatcctgactatatagat
gcatatcttaggcttgctgccatctcaaaagctcggaataacattcaattaagcattgaa
ctggttaatgatgccttgaaagtgaatgagaagtgtccaaatgcattgtccatgcttgga
gaactagagcttaaaaatgatgactgggtcaaggcaaaagaaacatttcgagctgctagt
gaagcagctgatgggaaggattcttattcgacactctctctggggaactggaactatttt
gctgcaatgcgcaatgagaagagggcaccgaagctagaagccactcatttggagaaagca
aaggagctttataccaaagttctagttcagcataattctaacttatatgctgccaatggt
gctggagtggtcttggccgagaaggggcagttcgatgtttcaaaagatatgttcacacag
gttcaagaagctgcaagtggaagtatatttattcagttgcctgacgtgtggatcaatata
gcacatgtttattttgctcaaggaaacttcccattggccgtgaaaatgtatcaaaattgc
ttgcggaagttttatcacgacacagactctcatattcttctttatttggcgcgcactcat
tatgaagctgaacagtggcaagactgcaagaaaactttgttaagggccatccacttgtca
cctgcaaattatgtattaaggtttgatgctggtgttgcaatgcagaaattctcagcatcg
acactgcaaaaatcaaagagaacggcagatgaggtgcgttcagcagttgctgagcttgag
aatgctgtccgcgtgtttagtcaaatggctgccggtgccaatcttcattatcatgggttt
gatgagaagaaaattgatacacatgttggatattgtaagcacttacttgaggctgcaaaa
gttcactgtgaggcagctcagcgtgaggaagagcaggcacggcaaaggcaagaacttgcg
cgtcagcttgcactggctgaggaagcccgccggaaggctgaggaacagaggaagaagcag
ttggaaaagagaaaactggaggatgagcagaagcgggttcagcaacaagaggagcacttc
cggcgtgtaaaggaacaatggaagagtagcacatctgcttctaagcggagggaaaggtct
gatgccgatgatgaagagggtgggcatagcgagaagaggaggagaaaaggtggtaagaga
agaaggaaggagagaagttcaaagtcccaatatgagatggaggaagcagaagttgacgat
caggaatatgaagatgcccccttaaattatggggagcctgctgatcaaatgcatgatcag
gatgacaatgctgaagaaaatgcccaggatgtacttgcagcagctgggctcgaagattct
gatgctgaagatgagggtgtgcctccaccaaatgcaagtagacggaggaaagcatggtca
gaatcagacgaggaggaggaggagcgacggccggaaagcagcccggtcagagagaattct
gcagagcttcaagagagcgatggggaatttggggcggataacgagaagccgaatcaagac
gaagcagttgaggatgaagattag
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integrated database retrieval system
