Rhodamnia argentea (silver malletwood): 115740830
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Entry
115740830 CDS
T10595
Name
(RefSeq) nuclear pore complex protein NUP98A isoform X1
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115740830
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115740830
03036 Chromosome and associated proteins [BR:
rarg03036
]
115740830
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115740830
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115740830
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
115740830
NCBI-ProteinID:
XP_030530299
UniProt:
A0A8B8P6B5
LinkDB
All DBs
Position
9:complement(464923..473538)
Genome browser
AA seq
1031 aa
AA seq
DB search
MFGGTSPFGQSSSSPFGSQSVFGQASNPTNPFAPKPFGSPNPFGTQTGSSMFGGTSTGVF
GASQPSSNFSTATAFGASSSPSFGTSTPTFGSSSSAFGGSSPFGQKPTFSGFGSTPQTSP
FGSTSQPSQPAFGSNAFGSSPAFGASSQSAFGSTSTPPFGSASTPPFGATASAFGQASTP
AFGATSTPAFGSTTTTFGSTGTAFGSSTAPGFGTGGAFGTSSTPLFGPSSNPAFGASNTP
LFGASSTTAFGASNTPAFGAPSTPAFGASSTPAFGASSTPAFGASSTPAFGSSSSPSFSF
GTSSAFGQSTSAFGGNPFGTTSPPFGSQIGAQATTPFGIGQSTFGGQRGGSRVSPYTPTT
EAESSGAQSAGKLESISAMPVYVDKSHEELRWEDYQAGDKGGPNPAGQSAGPIGFGAPSS
TPSPAFSQSSPFPSNTTSNPFASKPFSGTGFGSSGTPSNSLFGSSTASTAPSLFGSTTTP
AFGASSSPSIFSTSGPSAFSSSPAFFSSPTMGSTPFGSGFTSQSSPLYSSTTPSFGQAGS
AFGQSTSTFGQTTPLFGQTPSPFGQTTTPSLGQTNMFSTPASGFGGSMFPSTSLHPSTTP
AGFSQITPSFSTPFQPSQPAQTTGPFSFGNLGQTQTAGTSGFGSQNIFGQSNLGNLSANL
TPAVMQPVPVTNPFGTLPAMPQVSIGRTGTSSSIQYGISSMPVVEKPASVRISSLLTSRH
LSQRRIRLPVRKYHPKSDAPKVPFFSEDEETPSTPKADALFIPRENPRALVIRPSEQWPS
RTRTEKPSPLKDTSGPRQENATGGPDENGRVKDQTDHIRGSHKSNGVHDDHSVQKGDSSM
TLNGHRAGEAAIAYEHGADIEALMPKLRHSDYYTEPRIQELAAKERAEPGFCRRVKDFVV
GRHGYGSIKFMGETDVRRLDLEAIVQFNNREVIVYLDDNKKPPIGQGLNKPAEVTLLNIK
CSDKKTGQQWTEGPKTEKYKELLKKKAEDQGAEFVSYDPVKGVWKFKVSHFSKYKLEDEF
DDWNVSAASET
NT seq
3096 nt
NT seq
+upstream
nt +downstream
nt
atgtttggcggaactagcccttttgggcaatcatctagcagtccttttgggtcccaatca
gtctttgggcaggcaagtaacccaacaaatccttttgccccaaaaccttttgggagccca
aacccttttggcactcaaacggggagctccatgttcggtggaacttcaactggggttttt
ggtgcttctcaaccctcttctaatttttctactgcgactgcctttggtgcttcatcttca
ccatcttttggaacttcaacacccacttttggaagctcttcctcagcttttggtggatct
tctccttttggacaaaagcctacttttagtgggtttggttcgacgcctcaaacgagtcct
tttggaagcacaagtcagccatcacagccagcatttgggagcaatgcttttggttcctcc
cccgcctttggcgcatcaagtcagtcagcatttggcagtacaagcactccaccctttggt
tctgctagtacccctccatttggagctactgcttctgcctttggacaagcaagcactcct
gcctttggtgctacaagcacccctgcctttggttcaactaccactacatttggtagcaca
gggactgcatttggctcatcaaccgccccagggtttggtactgggggagcttttgggact
tccagtaccccactttttggaccttctagtaaccctgcatttggcgcatctaatactcct
ttatttggcgcttcaagtaccactgcttttggtgcatcaaataccccggcttttggtgct
ccaagtaccccagcctttggtgcttccagtactccagcttttggtgcttcaagtactcca
gcttttggtgcctcaagtacacctgcttttgggtcttctagtagtccatcctttagtttt
ggcacttcttctgcttttggccaatcaacctctgcatttggtggcaatccatttggaact
acgtcacccccttttggatcccagattggtgcccaggccacaacaccttttggaattggg
caatcaacttttggaggtcagcgtgggggaagtagagtttctccttacacaccgacaact
gaggctgagagtagtggggctcaatcagctggtaagctagagtcaatatcggcaatgccc
gtatatgttgataagagccatgaggagcttagatgggaggattatcaagcaggagataaa
ggtggaccaaatcctgctggtcaatctgctggtcctattggcttcggcgcaccttcttca
actccttcgccggcatttagtcaatcatctccttttccttccaacacaacctccaatcct
tttgcttctaaacccttcagcggtactgggtttggatcctcgggtacacctagcaattca
ctttttggttcttcaactgcgtcaactgcaccttccttgtttggatcaactacaactcct
gcatttggtgccagttcatctccatccattttttctacatcaggcccttctgctttcagt
tcatcaccagcattttttagttctccaactatggggagcactccgtttggctctggtttt
acctctcagtcctccccattatattcatctactacgccatcctttggccaggctggctct
gcctttggacagagcacttctacttttggacagaccacgcctctctttggacagactcca
tctccttttggtcagacaaccactccttccttaggtcaaacaaacatgttcagcacgcct
gctagtgggtttgggggaagtatgttcccaagtacttctcttcatccttctacaactcca
gctggattcagtcagataactccctccttctcgactccctttcaaccatctcaacccgcc
caaacaaccggtccttttagttttggcaacttgggtcagacacaaacagctggtaccagt
ggttttggtagccaaaatatatttggccagagcaatctcggaaatctgtcggccaaccta
acccctgccgtaatgcaaccagttcctgtcactaatccattcggaacccttcctgccatg
cctcaagtatcaattggtcgaactgggactagttcttctattcagtacggaatttccagc
atgccagtggtggaaaaacctgcttctgtccgtatatcctctttattaacatcccgacat
ttgtcacaaaggcggattaggttgcctgtaaggaaataccaccctaagagtgatgcgcca
aaggttcccttttttagtgaggatgaagaaacacctagcacaccaaaggctgatgctctt
ttcattcctcgggaaaatccgagggctctggttatccgtccatctgagcagtggccttca
agaactcgcacagagaaaccatctccattgaaggacacatctggacccaggcaggaaaac
gcaacaggaggtccagatgaaaacggtcgtgtgaaggatcaaacagatcatattagaggc
agccacaaatcaaatggagtccatgatgatcactctgttcagaaaggtgactcctcgatg
acgctcaatggacacagggctggtgaggctgcaatagcgtatgagcatggtgcagacatt
gaggcactaatgcccaagcttcgtcactctgattactacactgaacctcgaatccaagag
ctggctgccaaggaaagggctgagccaggtttctgccgccgtgtcaaggactttgtcgtg
gggcggcatggttatggaagtatcaagttcatgggtgagactgatgttcgacggcttgat
cttgaagccattgtccagtttaacaaccgagaggtgattgtttacttggatgacaacaag
aaacctcctattggacaaggtctcaataagccagctgaagtgacacttcttaacatcaag
tgttccgacaagaagactggacaacagtggacagaagggcctaaaacagagaagtacaag
gaactgctcaagaagaaggccgaggatcaaggtgctgagtttgtgtcgtatgaccctgtc
aagggagtgtggaagtttaaggtcagccacttcagtaagtacaagcttgaagatgaattt
gatgattggaatgtatctgctgcctctgagacctga
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