Rhodamnia argentea (silver malletwood): 115740975
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Entry
115740975 CDS
T10595
Name
(RefSeq) nuclear pore complex protein NUP85
KO
K14304
nuclear pore complex protein Nup85
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
115740975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115740975
03036 Chromosome and associated proteins [BR:
rarg03036
]
115740975
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115740975
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115740975
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleopor_Nup85
Motif
Other DBs
NCBI-GeneID:
115740975
NCBI-ProteinID:
XP_030530510
UniProt:
A0A8B8P6N2
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Position
4:complement(20492000..20498504)
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AA seq
719 aa
AA seq
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MPGAASDSGGGGSAGAGALVPLSSETKQSPVYPLRHSVGPPVSPRVSVCWARGSSLRVSI
FQQQSPSCGEGDVGGEVVEVKLSGGDGEISDAQWRRIAYGSMSPFAMLQSRRNSVSTLSR
ISPSPYHVDWWEFVMEYSKDINALLGSPRSTPASVIEDPKTVLKKSEKPTSLKAAWELME
LFYADKLSQAWLPERLIDWLADYDSLFSGSCATVHSKLVDFQNELINIQVIEDNPRYWEV
IGSALAVGWLEIVVKLLHLHGSYQLDQLSSRETESGLVEAVAVLISRMPRMRLELGDGRL
GECYKAKPDFIKAWEKWRAQITKMDCSAYWIQCNHLQTREGLKNLLQIMLGNTNSLSSAT
YHWLELYVSHFLYVRPFTVGLESMHGLAQKCIQLKPVPRSQKLMGLLLGILGENTEVVLA
ECSKQFGPWMVAHAIELMTAGSDEAESLLCEEHYNLGELSIQELHRLVYAQVLSSHAFTW
QIAPVYLTSCMKQGMGLLEILLCKQPVQHNELLHKNLEICRLYELDSVSSHIMKIAGVHH
WKHGRKGAGVFWLQQARDEFRLHKIAQQLFASVGKSISDESFKQWEGLIELLGSESKTAG
GLEFLHKYRDFKRSLKHIHDGKSIEAAQQAVESLMLLMKNPSTPQRFWLPLLYDSLKLIN
WQDRPVLNVTQTNLLLNRLQELSIARLRPDFVEADLPSQALSAVRLALATNLGRAILEE
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgccgggagccgcgtcggactcaggcggcggcggcagcgccggcgccggcgcgttggtg
ccgctttcttcagaaaccaagcagtctcccgtctatcccctccgccactccgtcggacct
ccggtttctcctcgagtctccgtctgctgggcgcgtggcagctccctgcgcgtctcgatc
ttccagcagcaatctccctcctgcggcgaaggcgacgtgggaggggaggtcgtcgaggtc
aagctcagcggcggagatggagagatcagcgacgcgcagtggaggaggatcgcgtacggt
tcgatgtcgccgttcgcgatgctccagagccggaggaactcggtctcgaccttgtcgagg
ataagtccatctccttaccacgtagattggtgggagtttgtcatggagtacagcaaagac
ataaatgcacttctaggtagtccaagatctactcctgcatcggttattgaagatccgaag
acagttttgaagaaaagtgagaagccaacatctttgaaagctgcatgggagttgatggaa
ttgttttatgctgataagctgtctcaagcatggttaccagagcggcttattgattggtta
gccgattatgatagcctattctctggctcttgtgcaacagtccactctaaacttgtggat
ttccagaatgaacttataaatatccaggttattgaggacaatcctaggtactgggaagtg
atagggtcagctcttgcggtgggctggttagagattgttgttaaattgttacatctccat
gggtcttaccaactggatcagctaagtagtcgtgagacagagagtggactggtagaggca
gttgctgttcttatctcgagaatgccacgcatgcgtcttgaactaggagatggaagatta
ggtgaatgctataaagctaaacctgactttattaaggcatgggagaaatggagggcacaa
attaccaagatggactgcagtgcatattggatccaatgtaatcatcttcagacaagagaa
ggcttgaaaaatttactgcaaataatgctggggaacaccaacagtctttcatctgcgacc
tatcattggctagagctatatgtttctcacttcttgtatgtcaggccattcacagtgggt
cttgaaagcatgcatggcctcgcgcaaaaatgcattcagttgaaaccagtgcctagatcc
cagaagttgatgggacttcttcttggaattcttggggaaaatacagaggtcgtattagca
gaatgctctaaacagtttggcccttggatggttgcgcatgccatagagttgatgactgct
gggagtgatgaagcagaaagtcttttgtgtgaagagcactataatctcggggagctctct
atacaggagctccatcgactggtctatgctcaagttctctcttctcatgcatttacatgg
cagatcgctccagtttatttgacatcgtgcatgaagcagggaatgggcttgttagagatt
ttattgtgtaagcagcctgttcagcataatgaactgctgcataagaatttagagatctgc
cgtttatatgaacttgacagtgtcagctctcatataatgaagattgccggtgtgcatcac
tggaagcatggccgaaaaggtgctggggttttttggctccaacaagctcgggatgaattt
cgtcttcataaaattgctcaacagttgtttgcttctgtgggaaagtctatttcagatgaa
agtttcaagcaatgggaaggtctcattgagttgctgggttctgagtctaaaactgctgga
ggtcttgagtttctgcacaagtacagggatttcaagaggtctcttaagcacattcatgat
ggaaaaagcatagaagctgctcagcaagctgtggagtcccttatgttgcttatgaaaaac
ccttccacacctcaacgattttggctgcctcttctgtatgactcgttgaagttgattaat
tggcaggatcgacctgtattaaatgtcactcagaccaaccttctgttaaatagactgcaa
gagctatccatagcgaggctgcgtccggacttcgttgaagctgacttgccatctcaagcc
ttaagcgccgtaaggctagcccttgccacaaaccttggacgtgctattttagaagaatga
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