Rhodamnia argentea (silver malletwood): 115741321
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Entry
115741321 CDS
T10595
Name
(RefSeq) paired amphipathic helix protein Sin3-like 2
KO
K11644
paired amphipathic helix protein Sin3a
Organism
rarg Rhodamnia argentea (silver malletwood)
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rarg03036
]
115741321
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Histone modification proteins
HDAC complexes
Sin3A-HDAC complex
115741321
REST complex
115741321
Heterochromatin formation proteins
Other heterochromatin formation proteins
115741321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAH
Sin3a_C
Sin3_corepress
PAH_ZNF598
HHD_RTEL1
Motif
Other DBs
NCBI-GeneID:
115741321
NCBI-ProteinID:
XP_030531045
UniProt:
A0A8B8P865
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All DBs
Position
8:complement(6134780..6145990)
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AA seq
1395 aa
AA seq
DB search
MKRTRDDVYPGSQFKRPFGSSRGEYYGQSQVTGTGAMEGGGGVVGGGSASQKLTTNDALT
YLKEVKDMFQDQREKYDMFLEVMKDFKAQRTDTTGVIARVKELFKGHNKLILGFNTFLPK
GFEISPDEDETPTKKNVEFEEAISFVNKIKKRFQNDEHVYKSFLDILNKYRKEHKDINEV
YSEVANLFGDHPDLLEEFTKFLPDNSATASAHNFPYARNSFQRQHERGSATPTLRQMQMD
KQRARRDRIINAHAENDINVDRPDMDDDKAMMKVHKDQRKRFEKDNRDRRNREVDDRESE
HDTSRDFNSQRFPDKRKSARKVENYGMNSLSEERDAQKSMYNQGFIFCEKVKERLCSSED
YQAFLKCLHMYSSRIIRKNDLQSLVTDLLGKYPDLMEEFNGFLERCENSDGFLAGIVSKR
SLSTDGHMSWTAKAEDKDKEHKRENDGARDKERCKDKYMFKSIQELDLSNCQRCTPSYRL
LPDDYPIPSVSQRSEIGAQLLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELD
MLLESVSSTAKRAEEVLNNINENINNLETPIQIESYFTALNLRCIERLYGDHGLDVMDIL
RKNPAVALPVMLVRLKQKQEEWTRCRSDFNKIWAEIYAKNHYKSLDHRSFYFKQQDSKNL
STKSLVAEIKELKEKKQKEDDVLLAIAAGSRQPIVPHLEFEYSDVKVLEDLYKLVRYSCE
EVCSSKEQFNKVMRLWATFLEPMLGFSSRPPGSDGAEILGSAMRSIIKCTASSRRGSEET
SDADAGKVNFLQSKLRNNTDENASSELAGVGKAALLDGDASAKENNCLVSKCADRDDSVC
DTHLSEKEAKDVDLSEKVAASNVQVTSSAQTCGCTPPLVSENSRERISVEAISGSCSNAL
PSHPKDTANKDHESKGIQDSVPLSEGNAVGKMSVHGILQDSVKISWNQVGTVGPSKLEKE
EGELSPNEEFEEENLEVYAANSLTETRHHIDRQEGRSGNLNHVAGQDGGDNGADADDEDS
ENVSETGGDVSGSDSAGDACSHEEPEEEDDLERDEADGKSESEGEAEGTADAHSVGGDSN
PLPLSERFLSSVKPLSKHVTTPLFNGVGKDSRLFYGNDNFYVLFRLHQILYERILSAKTS
SLGAEMKRRTSKDSSSSDLYARFMSVLYKLLDGTLENAKFEDACRDIIGNHSYILFTLDK
LIYKLVKQLQTVASEDMDNKLLQLYEYEKSRKQLIDPVYYENTRIFLHEENIYRLEFSSS
PSRMSIQLMDSISEKPEVFAISIDPNFADYLYNDFLSVFPGKKKLHDTFLLRNKRKYASL
DECSASCMVMEGARIINGLECKIACNSSKISYVLDTEDLFFRPRRKRKGSSNTGFAASSY
NLAKIQKFHRFLSSS
NT seq
4188 nt
NT seq
+upstream
nt +downstream
nt
atgaagagaacgagagatgacgtttaccctggttctcaattcaaacgtcctttcggttct
tcacgtggagagtactatgggcaatcccaagtaacgggaacgggagctatggagggtgga
ggcggggttgtaggtggaggtagtgcatcacagaaactaaccacaaatgacgcattgaca
tacctcaaggaagtgaaggatatgtttcaagatcagagggaaaagtacgacatgttcctt
gaggttatgaaagatttcaaggctcaaaggactgacactacgggagtcatagcaagagta
aaggaattatttaaagggcataacaaattaattctgggatttaacactttcttgccaaag
ggatttgaaatatccccggacgaggatgaaacaccaacgaaaaagaatgtggaatttgaa
gaagccatctcttttgttaataagatcaagaaacggttccaaaatgatgagcatgtctat
aaatcatttttggacatcctcaataagtaccggaaggagcacaaggacattaatgaggtc
tacagtgaggttgctaacctttttggcgaccatccggacttactcgaggagttcaccaaa
ttcttgcctgataattcagcaacggcctccgcgcacaactttccttatgccaggaattca
tttcagcgtcaacacgaacgtggctctgctacaccaaccttgcggcaaatgcaaatggat
aagcaacgagcgcggcgagataggattatcaatgctcatgctgagaatgatataaatgta
gatcgtcctgatatggacgatgataaagcaatgatgaaggtacacaaggatcaaagaaag
cgttttgagaaggataacagggacaggagaaaccgtgaagtggatgatagagagtctgag
catgacactagcagggatttcaactcgcagcgctttcccgacaaaagaaaatctgcaagg
aaggttgaaaactatggaatgaattctttaagtgaagagagggatgctcaaaagagcatg
tataaccaaggattcattttctgtgaaaaagtcaaggagagattgtgcagctcagaagat
tatcaggccttcttgaagtgccttcatatgtacagcagtcgaattataaggaaaaacgac
ttacaaagcttggtgacagatctgcttggaaagtatcctgatctcatggaagaattcaat
ggctttttggagcgctgcgagaatagcgatggctttcttgctggtattgtgagtaaaagg
tcgctctctactgatgggcacatgtcctggacagcaaaggcagaggataaagataaagaa
cataagcgcgagaatgacggagccagagataaggaaagatgcaaagacaagtatatgttc
aaatccattcaagagctggacttgtctaattgtcaacgctgtaccccaagttaccggctt
ctaccagatgattatccaataccttcagtcagccagagatcagagattggtgctcaacta
ctcaatgaccattgggtatccgtgacgtcaggtagtgaggattactcgttcaaacatatg
cgcaggaatcagtatgaagaaagtttattcagatgtgaagatgacagatttgagctggac
atgctgttagaatctgtgagctccactgcaaaacgggcagaggaagtcttgaacaacatc
aacgagaatattaacaacttggagactcctattcaaattgaaagttacttcactgctctc
aatctacgatgcatcgagcgtctatatggtgaccacggtctggatgtaatggacatcctc
cgtaaaaatcctgctgttgcgttgcctgtcatgttggttcgccttaagcagaaacaggaa
gaatggacaaggtgtcgttcagattttaacaagatttgggctgaaatttatgctaaaaac
cactacaaatcacttgatcatcgcagcttctatttcaagcagcaggattcaaagaaccta
agtacaaagtctttggtggctgagatcaaagaattgaaagaaaagaagcaaaaagaggat
gatgttctccttgccattgctgctggaagtagacaaccgattgtcccacatttggagttt
gaatactctgatgtaaaagttcttgaagatttgtataaacttgttcgatactcttgcgaa
gaggtttgctcctccaaagagcagtttaataaagtaatgcgactttgggctacctttctg
gaaccaatgctgggattttcttctagacctcctggctctgatggtgctgaaattcttgga
agtgcaatgcgcagtattatcaaatgtactgcatctagcagaagaggaagtgaagaaacc
tctgatgctgatgctggcaaagttaatttcctgcagtcaaaattgaggaacaacacagac
gagaatgcctcatcagaactagcaggtgtcggcaaggccgctttgctcgacggagatgct
tctgctaaagaaaacaattgtctagtttcaaaatgtgcagatagagatgattcagtgtgt
gatactcatctttctgagaaggaagcaaaggatgtggatctgtcagagaaagttgctgct
tccaatgttcaagttacctccagtgcacaaacatgtgggtgcaccccgccgcttgtttca
gagaacagtcgtgagagaatcagtgtggaggcgatatcaggttcctgttccaatgctctt
ccttcccatcctaaggatactgccaacaaagaccatgaatccaaaggtattcaggactct
gtaccattatcggagggcaatgctgttggaaaaatgagtgttcatggaatacttcaagat
agcgtgaaaatcagctggaatcaagtgggtactgttggaccatccaaactagaaaaagaa
gagggtgagttatcaccaaacgaggaatttgaggaggagaaccttgaggtgtatgcagcg
aactctctaactgagacaaggcaccatattgacagacaagagggtcgatcaggtaacctc
aaccatgtagctggccaggatggtggagacaatggtgcagatgctgatgatgaagacagt
gaaaatgtttctgaaactggtggagatgtctcaggcagtgattctgccggagatgcatgc
tcccatgaagagcctgaagaggaggatgatttagagcgtgatgaagccgatggtaagtct
gagagtgaaggtgaggctgaggggactgctgatgcacactctgttggaggagatagcaac
ccattgcccctttcagaacgcttcctttcctcagtgaaacccctttcaaagcatgtaaca
actcctctatttaatggagtggggaaagattcccggctgttctatggaaatgacaatttc
tacgtgctttttagacttcatcaaattctctatgaaaggattttgtcagcaaaaacaagc
tcgttaggtgctgaaatgaagcgaagaacttcgaaggattcatcttcttcagatctgtat
gccagattcatgtctgtcctctacaagttgcttgatggaactcttgaaaatgcaaaattt
gaagatgcatgcagagatatcattggaaatcactcatacattctatttacgttggacaaa
ttaatatacaagttggtcaagcagcttcaaactgtagctagtgaggacatggacaacaag
ctccttcaattgtatgaatatgaaaaatctcggaaacagctaattgatcccgtgtattat
gaaaacactcgtatctttctccacgaggaaaacatatatcggttggaattttcgtcctct
ccatctcgtatgtccatccagctgatggacagtataagcgaaaagcctgaggtttttgca
atttcaatagaccctaactttgctgattatctgtacaatgacttcctttcagtttttcct
ggcaaaaagaagctgcatgacacatttttgctaagaaacaaacggaaatatgcgagtctg
gatgaatgttctgcttcgtgtatggtcatggaaggtgcaagaatcatcaatggtttggaa
tgcaagatagcttgcaactcatcgaagatctcatacgtcctggatactgaggatctcttc
tttcgtccaagacggaaaagaaaaggttcttcaaacacaggattcgcagcttcatcttac
aatctggcaaaaatacaaaagttccacaggttcttgtcatcatcatag
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