Rhodamnia argentea (silver malletwood): 115741887
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Entry
115741887 CDS
T10595
Name
(RefSeq) nuclear pore complex protein NUP107
KO
K14301
nuclear pore complex protein Nup107
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03013
Nucleocytoplasmic transport
Brite
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
115741887
Chromosome and associated proteins [BR:
rarg03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
115741887
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115741887
NCBI-ProteinID:
XP_030531763
UniProt:
A0A8B8PCL4
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Position
7:13409120..13430847
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AA seq
1088 aa
AA seq
DB search
MEDEMDASPSYFDPEDLSVREQFRRYGRGQSSTSNVSPQKRSGLMVRQGSLLYDGTSIHS
PTNAALLLEDIKQEALGFDADYPEGSPARTQSSSKRRYSIEGHGKSEAETGFDSVRRAGS
HSLKACKQEDESSSDSGETTFSLFASLLDSAIQGLMSIPDLILRFESSCRNVSESIRYGP
NIKHRIVEDKLMRQKAQFLLDEAASWSLLWYLYGKGNEDIPKDIYVYPTTSHLEACRFVS
NDHTAQLCLRVVRWLEGLASKALDLESKVRGSHVGTYLPSSGIWHHTQRFLKKGRSDTDT
VRHLDFDAPTREHAHQLPDDKKQDNLLLEDVWTLLRAGRLDEACDICRSAGQPWRAATLR
PFGGLDLFPSCEALVKNGKNRTLQAIELENGIGHQWRLWKWASYCASETISEDGRNFEAA
VYAAQCSNLRRLLPICTDWESACWAMAKSWLDLLVDMELARLQPGGMTHSKSYGDDIDGS
PEQIEGTSQSSSGPENWPLQVLNQQPRHLSALLQKLHSGDAVHEAVMRGCKEQQRQIEMK
LMEGNIPQLLDLIWSWIAPAEDDQNVFRPHGDPQMIRFGAHLVLVLRYLLADEIEDAFKE
KIMTVGDFILHMYAMFLFSKQHEELVGIYASQLARHRCIDLFAHMMELRVNSSVHVKHKI
FLSAIVYLPFSPSDDSKGSFEEIIERVLSSSRETKVRKYDNTLDVAEQHRIQSLQKAMVI
QWLCFTPPSTITDVAVVSVKLLLRALMHSNILFREFALISLWRVPAMPIGAHKLLSFLAE
PLKQLSENLDALESYDISEDLSEFQDWSEYYSCDATYRKWLKIEQDNAEVSAVELSQEEK
ERASVAARETLQSARSLLLRKEHPWLTSREENMYKAMEPIFLELHASASLCLPSGECMCP
DATICATLMSALYSSVSEEVVLERQLMVNVAISSKDKYCIEVVLRCLAIEGDGLGFHLLN
DGGILARMVAAGFKGELARFQVGVTMEISRLDAWYSNKDGSLEGPASYIVRGLCHRCCLP
EVILRCMQVLVSVVESGGPPESHDDLIELITSSETGLLHLFSQQQLQEFLFLEREYSICC
MEQQEVDE
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaaatggatgcatctccaagctattttgacccagaggatctttcagttaga
gagcaatttcgacgatatgggagagggcagtcgtcgacttctaacgtttcaccccagaaa
cgttcgggattgatggtaaggcagggtagcttgttgtacgatggaacaagcatccacagc
ccaacaaatgccgcacttcttcttgaagacattaagcaagaagccttgggctttgatgct
gattacccagagggatcacctgcaaggacccaatcttcttccaagagaagatactccatt
gagggccatgggaagtcagaggcagagacgggttttgattcagtccgaagagctggaagt
cattcgctgaaagcttgtaagcaggaggatgagtcatcatcggacagtggagagacgaca
ttctctttatttgcttctctgctggattctgctattcaagggctgatgtctatacctgat
ctgatactacgatttgagtcatcttgtaggaatgtttcagagtcaatcaggtatggtccc
aatataaagcatcgcattgtggaggataagctaatgagacaaaaggctcaattcttgctt
gatgaggctgcttcatggtctctcctgtggtatctatatggaaaagggaatgaagacatc
ccaaaagatatatatgtgtatccaactacatcacatttggaggcttgtcggtttgtttca
aatgaccatacagcacagttgtgcctccgggttgttcggtggttagagggattagcttcc
aaagcacttgatttggaaagcaaggtgcgaggatctcatgttggaacctatcttcccagc
tctggaatctggcatcacacacagaggtttctgaagaagggtcgttctgatacagacact
gttcgtcacttggattttgatgctccaacacgtgaacatgcgcatcagctgcctgatgac
aaaaaacaagataatttgctattggaagacgtctggactttattaagggctgggagactc
gatgaggcttgtgacatttgtcggtctgctggacagccatggagagcggcaactcttcgt
ccatttggagggttggatctatttccttcctgtgaagccctggtaaagaacggaaaaaat
cgtactcttcaagcaatcgaattggaaaatggcattggacaccagtggcgcctctggaaa
tgggcatcctactgcgcatcagagacaatttctgaggacggtcgcaatttcgaagctgct
gtatatgcagcccagtgtagcaatttgaggcgcttgcttccaatatgtacagactgggag
tctgcttgctgggcaatggccaagtcctggcttgatcttctggtggacatggaacttgct
cgcttgcagcctggtggaatgactcattcaaagagttatggagatgatattgatggcagt
cctgaacaaatcgagggcacatctcagtcttcatcggggcctgaaaattggccactgcaa
gttcttaaccagcagccacgacatctttctgctcttcttcagaaacttcattcaggcgat
gctgtacatgaggccgttatgcgaggatgcaaagagcagcaaagacaaattgagatgaaa
cttatggaagggaatataccccagttgcttgatcttatctggtcatggatagcacctgca
gaagatgatcaaaatgtgttcaggccacatggggatcctcagatgattaggtttggagct
catttagtacttgtgctaagatacctgcttgctgatgaaattgaggatgccttcaaggag
aagattatgacagttggtgatttcattcttcacatgtatgcaatgtttctattctcaaaa
cagcatgaggaattggttgggatttatgcttctcagcttgcacgccaccgatgcattgac
ctctttgcccacatgatggaactcagggtgaacagcagcgtacatgtcaagcataagatc
ttcctttctgctatagtgtacttgccattttctcctagcgatgattcaaagggaagtttc
gaagaaataattgagagggttctgtcaagttcacgagaaaccaaagttagaaagtatgat
aatacattggatgttgctgagcagcatcgcattcaaagccttcaaaaggctatggtcatt
cagtggctctgcttcacaccaccttccaccattacagacgttgcagttgttagtgtcaag
ctgctgcttcgtgctctaatgcatagcaatatactatttagggaatttgctttgatttcc
ctgtggagagtgcctgcgatgcccataggtgctcacaagttacttagcttccttgctgaa
cctctgaagcagctgtcggagaatcttgatgctcttgagagttatgatatctcagaggat
ttaagtgaattccaagactggagtgagtactactcctgtgatgcaacttatcggaaatgg
ctcaaaattgaacaagataatgcagaagtttctgcagtagaactctcacaggaggagaag
gaaagagcttctgttgcagctagagaaaccctacagtcagcacgttcactactactcagg
aaagaacatccctggttgacttctcgtgaagaaaacatgtacaaggcaatggaacctatt
ttccttgagttgcatgcatctgcatcgctctgccttccatctggtgaatgtatgtgtcca
gatgccacaatttgtgctacgctgatgagtgcactttactcttcagtgagtgaggaagtg
gtgttagaacggcaattgatggtaaatgttgctatctcatccaaggataagtactgcatt
gaggtcgtcttaaggtgcttggccatcgaaggtgacgggctgggattccatttgctcaat
gacggtggcatccttgctaggatggtggcagctggcttcaagggtgagcttgctcgattt
caggttggagtcaccatggaaatctcccgattagatgcttggtattcgaataaagatggt
tctttggaaggcccagcatcatacattgtccggggcctgtgtcataggtgttgtctacca
gaagtcattctgcgatgcatgcaggtcttggtgtctgtagtggagtctggtggccctcct
gaaagccatgatgatctgattgaactgatcacttcatctgaaacagggctacttcatctg
tttagtcagcaacagttgcaggaatttttgttcttagagagggaatactccatatgctgc
atggagcaacaagaagttgatgagtag
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