Rhodamnia argentea (silver malletwood): 115742015
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Entry
115742015 CDS
T10595
Name
(RefSeq) squalene synthase 2
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg00100
Steroid biosynthesis
rarg00909
Sesquiterpenoid and triterpenoid biosynthesis
rarg01100
Metabolic pathways
rarg01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
115742015
09109 Metabolism of terpenoids and polyketides
00909 Sesquiterpenoid and triterpenoid biosynthesis
115742015
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
rarg01006
]
115742015
Enzymes [BR:
rarg01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
115742015
Prenyltransferases [BR:
rarg01006
]
Terpene biosynthesis
Squalene/phytoene synthase
115742015
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
Motif
Other DBs
NCBI-GeneID:
115742015
NCBI-ProteinID:
XP_030531942
UniProt:
A0A8B8PBD7
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Position
5:complement(13316689..13324806)
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AA seq
413 aa
AA seq
DB search
MGTLGAILKHPDDFYPLLKLKIAARNAEKQIPSPPHWAFCYSMLHKVSRSFGLVIQQLGT
ELRDAVCIFYLVLRALDTVEDDTSIPTDVKVPILTAFHQHVYDKEWHFSCGTKEYKVLMD
QFHHVSTAFLELGKGYQEAIDDITKRMGAGMAKFICKEVETVDDYDEYCHYVAGLVGLGL
SKLFHASGAEDMASDSLSNSMGLFLQKTNIIRDYLEDINEIPKSRMFWPRQIWSKYVNKL
EDLKNEENSVKAVQCLNDMVTNALTHVEDCLTYMAALRDPAIFRFCAIPQIMAIGTLALC
YNNIEVFRGVVKMRRGLTAKVIDRTKTMADVYGAFYDFSCMLKSKVDKNDPNATKTLSRI
EASQKACRDSGLLTRRKSYILASEPRYSSVLVLVLLVILAIILAQLSASRTSN
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atggggactttgggagccattctgaagcatccggacgatttctaccccctgctgaagctg
aagatcgcggcgaggaatgccgagaagcagatcccttcgccgccccactgggcgttctgc
tactccatgctccacaaggtctcccggagcttcggcctcgtcatccagcagctcggcacc
gagcttcgcgacgcggtgtgcatattctacttggtcctgcgagcacttgatacagttgag
gatgacacaagcatacctactgatgtcaaagtgcctatcctgacagcttttcatcagcat
gtgtatgataaagagtggcatttttcatgtggtacaaaggagtacaaggttctaatggac
caatttcatcatgtgtcaacagctttcctggagctggggaaagggtaccaagaggcaatt
gatgacattactaaaagaatgggagcaggaatggcaaaatttatttgcaaagaggtggaa
acagttgatgattacgatgaatattgccactatgtggcaggacttgttggtttaggtctt
tcaaagcttttccatgcttctggagctgaagatatggcatcagattctctatccaattca
atgggcttgtttcttcagaaaacaaacattattcgagattatttggaggatattaatgag
attccaaagtcacgcatgttttggcctcgtcagatttggagtaaatatgtaaacaaactt
gaggacttgaagaatgaggagaactcagtgaaggcagtgcaatgtttgaatgacatggtc
acaaatgccttgacacatgttgaagactgtttgacatacatggctgctttaagggatcct
gccatattccggttttgtgctattcctcagataatggcaattggaacattagctttatgc
tacaacaacattgaagttttcagaggcgtagtaaagatgaggcgaggtcttactgctaaa
gttattgatcgcacaaaaacaatggctgatgtttatggtgctttctatgatttttcttgt
atgctgaaatccaaggttgacaagaacgatcctaatgctacaaaaacattaagcagaatt
gaggcttcgcagaaggcttgcagagattctggcctcctaaccagaaggaagtcttacatc
cttgcaagcgaacccagatacagctccgtcctggtcttggttttgcttgttatactggcg
ataattttggctcaactctctgcaagcagaacaagcaactaa
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