Rhodamnia argentea (silver malletwood): 115742125
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Entry
115742125 CDS
T10595
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
115742125
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rarg03041
]
115742125
03110 Chaperones and folding catalysts [BR:
rarg03110
]
115742125
04121 Ubiquitin system [BR:
rarg04121
]
115742125
Enzymes [BR:
rarg01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
115742125
Spliceosome [BR:
rarg03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
115742125
Complex C
U4/U6.U5 tri-SnRNP related factors
115742125
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
115742125
Chaperones and folding catalysts [BR:
rarg03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
115742125
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
U-box type E3
115742125
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
U-box
zf-NOSIP
Motif
Other DBs
NCBI-GeneID:
115742125
NCBI-ProteinID:
XP_030532098
UniProt:
A0A8B8PDI2
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Position
11:complement(6426842..6436627)
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AA seq
590 aa
AA seq
DB search
MGKKQHSKDRMFITKTEWATEWGGAKSKETGTPFKRLPFYCCALTFTPFESPACTADGSV
FDIMSIIPYIRKYGKHPVTGAPLRHEDLIPLTFHKNAEGEFQCPVLNKVFTEFTHIVAVK
TTGNVFCYEAIKELNIKTKNWKELLTDEPFTREDIITLQNPSAIDSKVLLDFDHVKNDLK
VADEEKQKMSLDPTYNINVTGDIKQMLEEIGTEKGRQTALLGGGGSKAQNERAAALAAIL
AARSRIKEDAESNSNGEVKASQAYSIVDAASAAVHGRSASAAKASAIDKTASRIAMHMAG
ERDLVNAKLVKSRYTTGAASRSFTSTSYDPVTKNEYEYIKVEKNPKKKGYVQLHTTHGDL
NIELHCDIAPRTCENFITLCERGYYNGVAFHRNIRNFMIQGGDPTGTGRGGESIWGKPFK
DELNSKLLHSGRGVVSMANSGPHTNGSQFFILYKSANHLNFKHTVFGGVVGGLTTLAAME
KVPVDDNDLPQEEIKITGVTVFVNPYNEPDEEEEKEMAENDKAAEDEENDKVGSWYSNPV
PVGGGQVGKYLKARSAPAGTAVTDSVTAENGVVKKRKVGVSTEYGNFSSW
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaaacagcacagcaaagaccggatgttcatcaccaagacggagtgggccacc
gagtggggcggcgcgaagtccaaggaaaccggcactcccttcaagcgcctccccttctac
tgttgcgcgcttacgttcactcccttcgagagcccggcgtgcacggccgatgggagcgtc
tttgatatcatgagcatcattccttatatcagaaagtatgggaagcatccggtgaccgga
gctccgctcaggcacgaggatttgattcctctcacatttcataagaatgctgaaggcgag
tttcagtgccccgtcctgaacaaagtttttactgaattcacccatattgttgctgttaag
actacaggaaatgtcttttgttatgaggcaatcaaggaattaaacatcaagacgaagaac
tggaaagaattgctgactgatgaaccattcacgcgggaggatatcattactcttcagaac
ccaagcgccattgacagcaaggtactccttgactttgatcatgtgaaaaatgatttgaaa
gttgctgacgaagaaaaacagaaaatgagtttggatccaacctataacataaatgtgact
ggtgacatcaaacaaatgcttgaggagattggcactgagaaagggaggcaaactgccctg
cttggtggcggtggcagcaaggcgcaaaatgaaagggctgccgcacttgctgccatttta
gcagcaaggtcccgcataaaggaggatgcagaatccaattcaaatggcgaagttaaagct
tcacaggcatacagtattgttgatgcggcttctgctgccgtacatgggagaagtgcttct
gcagcaaaagcctcagcaattgataaaactgcttctcggatagctatgcacatggctggt
gagagggatcttgtcaatgcaaagttggtgaagagccgctataccactggtgctgcatca
cgatccttcacttcaacttcatatgatcctgttaccaaaaatgaatatgagtacattaag
gttgagaagaatccaaagaagaagggatatgttcagctgcacacaacccatggggatctg
aatatagagctgcactgtgatattgctcccagaacatgtgagaacttcatcacactttgt
gaaagaggctattacaatggagtggcttttcacaggaacataagaaattttatgattcaa
ggtggtgatcctactggtactgggagaggaggtgaatcaatatggggaaagcctttcaaa
gacgagttaaactccaagttacttcattctggaaggggtgtagttagtatggctaacagt
ggtccacacacaaatggttcacagttctttattttgtacaaatctgcgaatcatttgaac
tttaaacatacggtttttggtggagtagttggcggcttgactacattggcagcgatggaa
aaagttccagttgatgacaatgatctgccccaggaagagatcaagattacaggggtgacg
gtatttgtcaatccttataatgaacctgatgaggaagaggagaaagagatggctgaaaac
gacaaggctgctgaggatgaagaaaatgacaaggttgggtcatggtatagcaatccagta
cctgtagggggtggccaggtagggaaatatttgaaagcgaggagtgctccagctggaaca
gctgtcactgacagtgtgacggcagaaaatggtgtcgtgaagaagaggaaagtaggagtc
tcaacagagtacggtaacttttcttcttggtga
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