Rhodamnia argentea (silver malletwood): 115742214
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Entry
115742214 CDS
T10595
Name
(RefSeq) crossover junction endonuclease MUS81 isoform X1
KO
K08991
crossover junction endonuclease MUS81 [EC:3.1.22.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03440
Homologous recombination
rarg03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115742214
03460 Fanconi anemia pathway
115742214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115742214
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Other HR factors
115742214
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ERCC4
WHD_MUS81
EME1-MUS81_C
HHH_8
DUF7943
Motif
Other DBs
NCBI-GeneID:
115742214
NCBI-ProteinID:
XP_030532212
UniProt:
A0A8B8PC80
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Position
5:1132393..1140419
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AA seq
673 aa
AA seq
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MEDQTGAVCPSNEGLVHFMLQKKLELSQAPKGLSENVEATLARAIHNISQSQSPINSLKE
LSQLKGVGKWILKLVRRYFENDSPNSENEDLTTKGKNAKATKRYLPKKNSVAYTLLITLY
RGTSNGNEYMRKQELIDAAEASGLSRVPIVPEKGKGKPGQFGSSPREWYSGWSCMKTLIT
KGLVMKSSSPAKYMLSQEGKDAARDCLLRSGLAESAHSDEGSLDLDMVKGVNLETASLES
SEDLTVQPICGRKRQNPPDIPPQTLERFLGMGYAKEQVLHAVAEVSKTSDGSDISALWPA
ILCQLKEDQVYGCSISTTFSMKRCSTSTRSAVAHGQVYIEGSQSTREELVCDDLTKTKYT
FTNASQSSFTVKPCSSNVCLYWDYPASGSGFVSLEGGMNVLSKPPLNFGERFQDVYEVIL
ILDDREQFATRGSRSQRIIDNICSQFSIKVEVRRLPVGDGIWIARHKYNDSEYVLDFIVE
RKKVEDLRSSIRDNRYKDQKLKLLRCGLKKLIYLVEGDPNHCEAAESIKTACFTTEILEG
FDVQRTSGLAGTLKNYGHLTQAIIHYYTLQLQRDQSKCTGVCPPFDEFIKRCQDVEKMTV
SDVFAIQLMQVPQVTEEAAIAVIDMYPTLLSLARAYALLDGDLCAQEEMLMKQTNNVVSK
LASKNIFRLVWGD
NT seq
2022 nt
NT seq
+upstream
nt +downstream
nt
atggaggaccagaccggagctgtgtgtccgtcgaacgaaggactcgtacatttcatgttg
cagaagaagcttgagctctcgcaggcccccaagggcttgtcggagaatgtagaggccact
cttgccagggcgattcacaatatttcccagtcccagtcgccgataaactccctcaaagag
ttgtcccaattgaagggcgttgggaagtggattctgaagctcgtgcgacgatattttgag
aatgattcgcccaattctgaaaatgaagacttgacgaccaagggtaagaatgccaaagca
accaagcgttatcttccgaaaaagaattccgttgcctacacattgctgattactctttat
aggggaacctcaaatgggaatgaatacatgcgcaagcaagaacttattgatgcagctgaa
gctagtggactttctcgggtaccaattgttccagaaaaaggaaaagggaaacctggtcaa
tttggaagttctccaagggaatggtacagtggatggagctgcatgaagacactaataaca
aagggattagttatgaaatctagctctccagcaaaatacatgctttctcaggaaggcaag
gatgccgcacgagactgtctgctgaggtctggtttggcggagtcagctcactccgacgaa
ggatctcttgacctggacatggtcaaaggggtgaatctggagactgcgagccttgaatct
tctgaagatttgacagtccaacctatttgcgggagaaagcggcaaaacccacctgatatt
ccccctcaaactcttgagagatttttgggcatgggatatgcgaaggagcaagttcttcat
gctgttgctgaagtttcaaaaacttctgatgggagcgatatttcagctctatggccagca
attctatgtcaactcaaagaggatcaagtgtacggttgttccatctcaaccacattttcc
atgaaacgttgttcaacttcaaccagatctgcagtggcacatggtcaagtatacattgaa
ggaagtcagagtacaagggaggagcttgtctgtgatgacctaaccaagacaaaatacacc
ttcactaatgcatcacagagctcttttaccgtgaaaccttgctcctcaaatgtatgtttg
tactgggattatccggcgagtggatcaggctttgtaagtttggagggcggtatgaatgtt
ttaagcaagccgcctctgaatttcggagagaggtttcaggatgtatatgaagtgatctta
atattggatgaccgagagcagtttgctactcgcgggtcacgttctcagagaataattgac
aacatttgcagccaatttagcatcaaagtagaggtcaggcggctgccagtaggagacgga
atctggatagctcgtcataaatataatgattctgaatatgttcttgattttatagtagag
agaaagaaggttgaggatttgcgttcttctatcagagataatcgctataaggatcagaaa
ttgaagcttctgaggtgtgggctcaagaagctgatttaccttgtggaaggtgatccaaat
cattgtgaagctgccgaaagcatcaagacagcttgtttcacgacagaaattctggagggt
tttgacgtgcagagaacaagcggtctagctggtacacttaagaactatggtcatctgact
caagcgattattcattattacacattacaattgcaacgtgaccagtccaaatgcactggg
gtttgcccacctttcgatgaatttataaaaagatgccaagatgtggagaaaatgactgtg
agtgatgtctttgcgatccaactcatgcaggttccacaagtgactgaagaagctgctata
gctgttattgacatgtacccaacacttctctctcttgcccgtgcctatgctcttctggat
ggtgacctatgtgcccaagaggaaatgctaatgaagcagaccaacaatgttgtcagcaag
cttgccagtaaaaacatcttccgattggtatggggtgattga
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