Rhodamnia argentea (silver malletwood): 115742223
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Entry
115742223 CDS
T10595
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
115742223
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rarg03021
]
115742223
Enzymes [BR:
rarg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
115742223
Transcription machinery [BR:
rarg03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
115742223
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
115742223
NCBI-ProteinID:
XP_030532230
UniProt:
A0A8B8PBN1
LinkDB
All DBs
Position
5:complement(1447014..1463422)
Genome browser
AA seq
1173 aa
AA seq
DB search
MGATKPDAAEYEALRELVRHHIESFDHLVEHGLGTMLSNIKPVQIVDPFSKKTLRISFER
HEVYQPKKEGILRTNRDNLLPYECRQAKISYSGKFMVDLCFQYDNGPAVREKFNFGHLPI
MLKSKRCHLRGADPQKLVSCKEESSEMGGYFILNGLERVVRLLILPKRNYPMSMVRNSFR
DRREGYTDKAVVIRCVREDQSSVTVKLYYLQNGSARIGFWIQSREYLLPVGVVLKALIDT
NDHEIYASLTSCYSEKYERGRGVVGTQLVSERAKIIVDELRDLALFTRHQCLQHIGEHFQ
PVMEGLENESYISVADAVLWDYIFVHLKNNYDKFNLLIFMVQKLFSLIDQTSVPDNPDSL
QNQEVLLPGHLITIYLKDKLEDWLQKAKRLLQDEMKNKGKNFDFSSLAHVKKVMDKNPGR
QIGSAIENMLKTGRLVTQSGLDLQQRAGYTVQAERLNFLRFLSHFRAVHRGASFAGLRTT
SVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSFFDSKGEVRDFFKIGTSILNVL
IKVGMTPSLPKIFQAGPPEVLSVLLDGRVVGSIPSAEVEKAVSYLRRLKLSTTSGIPDDL
EVGYVPLSFGGAYPGLYLFTNPSRFVRPVRNISAPVDEGQNIELIGPFEQVFMEIRCPDG
GDGGRRKEFPATHEEIHPTGMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSSXAIHF
RADQKLYHLQTPQTPIVRTGAYTKYCIDEYPTGTNAIVAVLAYSGYDMEDAMILNKSSVE
RGMFHGQIYQTETIDLSEQSSKSDRAQRIFRRSNTDKSVHHWIDSDGLPHIGQMIHPNEP
YCSIYNEVTNTTKNQLHKGSESVIVDYVAVDVKNKKSLQKANIRFRHPRNPVIGDKFSSR
HGQKGVCSQLWPDVDMPFSGITGMRPDLIINPHAFPSRMTIAMLLESIAAKVGSLDGEFV
DATPFASSAKKTNGEEKSESENLVDQIGTRLRKKGFNYHGLEVLYSGVYGTELTCEIFIG
PVYYQRLRHMVSDKFQVRSTGTVDQITRQPIKGRKRGGGIRFGEMERDSMLAHGAAYLLH
DRLHTCSDYHIADVCSLCGSMLTTEFVQPQRRVGREIGGLPPLRAPKKVTCHSCQTSRGM
ETVAMPYVFRYLAAELAAMSIKMTLHLSNGAGA
NT seq
3522 nt
NT seq
+upstream
nt +downstream
nt
atgggagcgacgaagcccgatgcggccgagtacgaggcgttgcgagagctggtcaggcac
cacatagagtcgttcgaccacctcgtggagcacggtttggggactatgctttctaacatc
aagcccgtccaaattgtcgatcccttctccaagaagacgcttagaatctcgtttgagcgt
catgaggtatatcaacctaaaaaggagggcattttgaggacgaatcgcgataatctgtta
ccgtacgaatgtaggcaagctaaaatttcctactcagggaagttcatggttgacctctgt
tttcaatacgacaatggacctgccgtacgcgagaaatttaatttcgggcatcttccgata
atgttaaagtcaaagaggtgccacttgagaggcgctgatccgcaaaagttggtttcttgc
aaagaggagtcttctgagatgggtggctatttcatcttgaatgggctagagagagtggtt
cgtcttctgatattgccaaagcggaactatccgatgagcatggtgcggaattcatttcgt
gaccgacgtgaaggatatacagacaaagcagtagtaataaggtgtgtgagagaggaccag
tcttctgtgacagttaaactatattaccttcaaaatggtagtgcgagaattggattttgg
attcagtctagagagtatttgcttcctgttggcgttgttttgaaggcacttattgacacc
aatgatcatgaaatttatgctagtttgacaagttgctatagtgagaaatatgagaggggg
aggggtgttgtgggtactcaacttgtgagtgaaagggctaagattatagttgacgaactt
cgagatctggctctttttacacgacaccaatgtctgcaacatatcggagagcatttccaa
cctgttatggagggtctagagaatgaaagttacatctctgttgcagatgctgttctttgg
gactacatttttgtccaccttaaaaacaactatgacaagttcaatcttctcatctttatg
gtgcagaaacttttttctctcatcgaccagacttcagttccagataacccagattctttg
caaaatcaggaagttttactgcctggtcacctgattacaatttatttgaaggacaaacta
gaagattggctacaaaaggcaaaaaggcttcttcaagacgagatgaagaacaaaggcaaa
aactttgatttctctagcttggcacatgttaagaaggtcatggacaaaaatcccggaagg
cagattggttcagccatagaaaatatgttaaaaactggaaggctcgttacacaatcaggt
ctggatttgcagcagagggccggctatacagttcaagcggagaggctaaacttcctgcgt
tttctttcacattttcgggctgtacataggggtgcatcctttgcggggttgcggacaacg
agtgttcgaaagttgttacctgaatcttggggttttctttgccctgtacacactcctgat
ggggaaccttgtggtttgcttaaccatatgacttgcacctgtaggatcacatcgtttttt
gattcaaaaggagaagttcgagattttttcaagataggaacttcaattctaaatgttctg
attaaagttggaatgacaccttcactccccaaaatctttcaagctggccctcctgaagtt
ctctctgtcctactagatgggcgggttgtgggctctattccctctgctgaagttgaaaag
gctgtttcttatttgcgtagattaaagctgtcaactacttcagggattcccgatgatctg
gaggtaggatatgttcctttgagctttggtggcgcctatcctggtctttatctattcaca
aacccttcaagatttgtgcgcccagttagaaatatatctgctcctgtagatgaaggccaa
aacattgaactcattggtccatttgagcaggtgtttatggaaattagatgccctgatggt
ggagatgggggaagaagaaaggaatttcctgctactcatgaagagattcatccaactgga
atgctcagtgtggtcgctaacctcacaccatggtcagatcataatcagagcccacgaaac
atgtaccagtgtcagatggcaaaacaaacaatggctttctcttcataagccattcacttc
cgtgcggaccaaaaattgtatcatcttcagactcctcaaacgcccatagtacgaacaggt
gcatatacaaagtattgcatagacgagtatccaactgggacaaatgcaattgttgctgtg
ctggcttattcagggtatgatatggaggatgctatgattcttaacaagtcatctgtagaa
cgtggaatgttccatggacaaatataccagacagagaccatcgacttatctgagcaaagc
agcaaatctgatcgagcacagaggatttttaggcgaagtaacactgataaatcagttcac
cattggattgattccgatggacttccacacatcggtcagatgatacatccaaacgagcca
tattgcagtatatataatgaggtcacaaatactaccaaaaaccaactgcacaaggggtcg
gaatctgtgatagtcgattatgtggctgttgatgtgaaaaacaagaaaagtcttcaaaag
gcaaatatacgttttcggcatccaaggaatcctgtaattggtgacaaatttagcagtagg
cacgggcagaaaggtgtttgctcacagttgtggccagatgtggatatgcctttttcagga
ataacaggaatgcgtccagacttgataatcaacccccatgcatttccttccaggatgaca
attgctatgcttctagagtcgattgctgccaaggtgggcagcttagatggtgaatttgtc
gatgcaactccatttgctagctctgctaagaaaactaatggagaagagaaatctgaatct
gaaaatcttgttgatcaaattgggaccagattaaggaagaaagggttcaattaccatggg
ctggaagtgctatacagtggtgtctatggaacggaactcacgtgtgagatatttattggg
cctgtgtattatcaacgactaaggcacatggtctcggacaagtttcaggttcgctccact
ggaacggtagaccagatcacacgtcagcccatcaaaggaagaaagcgaggtggaggcatc
cgatttggggagatggaacgagattccatgcttgcacacggggcagcgtatttattgcac
gataggttacacacgtgttctgattaccatattgctgacgtatgctccctttgtgggagc
atgctcactacggagtttgtgcagccgcaaagacgtgtgggcagggagattggagggctc
ccgcctcttagggctcctaaaaaggtcacctgtcactcgtgccagacaagcagaggaatg
gaaaccgtcgcgatgccttatgttttcagatatttggctgctgagctagcagctatgagc
atcaaaatgaccttgcatttaagcaatggagcaggagcctga
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