Rhodamnia argentea (silver malletwood): 115742263
Help
Entry
115742263 CDS
T10595
Name
(RefSeq) DNA mismatch repair protein MSH2 isoform X2
KO
K08735
DNA mismatch repair protein MSH2
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03430
Mismatch repair
Brite
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
115742263
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
115742263
NCBI-ProteinID:
XP_030532305
UniProt:
A0A8B8PBW1
LinkDB
All DBs
Position
6:complement(6901890..6910153)
Genome browser
AA seq
942 aa
AA seq
DB search
MEEAFEEQNKLPEFKLDGKQAQGFLAFFKALPSDTRAVRFFDRRDYYTAHGENAIFIAKT
YYHTTTALRQLGNGTNGLSSVSISKNMFETIARDLLLERTDHTLEVYEGSGSNWRLVKTG
SPGNIGSFEDVLFANCDMHESPVVVAIVPIFRDAGYTVGLGYVDLTNRILGLAEFIDDSH
FTNLESALVALGCKECLLPMEGNKSNENKALRDALTRCGVMSTERKKTEFKTRDLVEDLG
RLVKGPVQPVRDLIGSFEYAPGSLGALLSYSELLADGSNYGNYSIRKYSLDCYMRLDSAA
MRALNVLESKTDANKNFSLFGLMNRTCTAGMGRRLLHRWLKQPLLDVGQINTRLDLVQAF
VDDTGLRQDLRQHLKRISDIERLVHNLNKRRAGLQHIVKLYQSSARVPYIKSTLHNYDGK
FSSLIKEQYVVELLILTNDDHLNKFISLVETAVDLDQLENGEYMISPSYDAGLAELKDEL
ASLEEQIQNLHKQTANDLDLPIDKALKLDKGTQFGHVFRITKKEEPKIRKKLSTQFIVLE
TRKDGVKFTNTKLKKLGDRFQKILEEYKSRQKFIVDKVVNTTVSFSEVFESLAALLSEMD
VLLSFADLASSCPTPYTRPDITPSDVGDIILIGSRHPCVEAQDWVNFIPNDCKLVREKSW
FQIITGPNMGGKSTFIRQVGVNILMAQVGCFVPCDKASISVRDCIFARVGAGDCQLRGVS
TFMQEMLETASILKGATDKSLIIIDELGRGTSTYDGFGLAWAICEYLVEVIKAPTLFATH
FHELTALANENNVLETNMKQVVGVANYHVSAHIDSLNRKLTMLYKVEPGACDQSFGIHVA
EFANFPESVVALAREKAAELEDFSPAAVILNDPGEQEGLKRKRDSDLDDMSKGAARARRF
LKEFSDLPVETMDLKQALLQVGKLRDELEKDAKDCGWLQQFF
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaggaggctttcgaagagcaaaacaagcttcccgagttcaaattagatggcaagcaa
gctcaagggtttctcgcttttttcaaagccctacccagtgacacaagggctgttcggttc
tttgatcggcgggattactatactgcccatggtgaaaatgctatcttcattgcaaagaca
tattaccatactaccacagccttgcggcaattgggtaacggaaccaatggcctttccagt
gtaagcatcagtaaaaacatgtttgaaacaattgctcgtgatctgcttttggagagaaca
gaccatactttggaggtctatgaaggtagtggctcaaattggagattggtgaagaccgga
agtcctggaaatattggcagttttgaagatgttttgtttgccaactgcgacatgcacgag
tccccagttgtggtggcaatagttccaatctttcgtgatgccgggtataccgtcggacta
ggttatgttgatttgaccaacaggattcttggattggctgaatttattgatgatagccac
ttcacaaatttggagtcagctttagttgcccttggttgcaaagaatgcttactgcccatg
gagggtaacaaaagcaatgaaaataaggctttgcgtgatgctttgactagatgtggggtg
atgtcgactgaaagaaagaaaacagagtttaagacaagggatttggtggaagatcttggt
aggcttgtcaaaggtcctgtccaaccagttcgagatcttattggcagctttgaatatgct
cctggttctttaggggcattattgtcctattcagaattactcgcagatgggagtaactat
ggcaattacagtatcagaaagtatagccttgactgctatatgaggctagattctgctgcg
atgagggctctgaatgtattggaaagcaaaacagacgcaaataaaaattttagtttgttt
ggtctcatgaataggacatgcactgctgggatgggtagacgattgttgcataggtggcta
aaacagcctttattggatgtaggccagataaacaccagactagatttggtgcaagcattt
gtggatgatacaggacttcgacaagatctgaggcagcatcttaagaggatctcggatatt
gagagattggttcacaatctcaataagagaagagcaggtttgcagcatattgtgaagctt
tatcagtccagtgcaagagttccatatatcaaaagtaccctgcacaactatgatgggaaa
ttttcttcactgatcaaggaacagtatgtggtggaacttcttattttgactaacgatgac
cacttgaataagttcatcagtctcgtggaaactgccgttgatcttgaccaacttgaaaat
ggggaatacatgatctctcctagttatgatgctggattagctgaactaaaggatgagcta
gcgtcacttgaagagcagattcaaaatttgcataaacaaactgccaatgatctcgatctt
ccaattgacaaagcattgaagttagataaaggcacacagtttgggcatgtatttagaatt
accaagaaggaggagccaaagataaggaaaaagctctccacccagtttattgtcctagaa
acccgaaaggatggagtgaagttcactaacacgaagcttaaaaagttaggtgaccgcttc
cagaagattcttgaagagtacaaaagtcgacagaaatttatcgttgacaaagtagttaac
acaactgtatccttctcggaggtatttgaatctttggctgcattgctttctgaaatggat
gttctccttagctttgctgatctggcttctagttgcccaacaccatatacaagaccagat
atcactccatctgatgtaggagatatcatcctaataggaagtagacatccttgtgtggag
gctcaagactgggttaactttatacccaatgattgtaagctagtcagagaaaagagttgg
ttccagattatcactggacctaacatgggaggaaaatccacgtttattagacaggttggc
gtgaacattctgatggctcaagttggttgttttgttccctgtgacaaggccagcatatct
gttcgagactgcatttttgctcgtgtgggtgctggggactgccaactgcgaggagtttcc
acctttatgcaagagatgcttgaaacagcatcaatcctgaaaggagctaccgataagtcg
ctgataatcattgacgagttgggtcgtgggacttcaacttacgatggatttggtttagcg
tgggcaatatgtgagtaccttgttgaggttatcaaagcgccgactttgtttgcaacccac
ttccatgaactgactgccttagctaatgaaaacaatgttcttgaaactaatatgaagcaa
gttgttggggtagcaaattatcatgtcagtgcacacattgactcgttaaatcgcaagctg
accatgctttacaaggttgagccaggggcctgtgatcaaagttttggtattcatgttgct
gagtttgcaaattttcctgaaagtgttgttgcactcgcaagagaaaaggccgcggaatta
gaggatttctcacctgctgcggtcattttaaatgaccctggagaacaggagggactgaaa
cgaaagagagactctgatcttgatgacatgtctaaaggtgctgctcgagctcgtcggttc
ttgaaggaattctctgatcttccagtagagacaatggacttgaagcaggctctgctacaa
gtaggcaaattgagggatgagttggagaaagatgcaaaagactgtggctggcttcagcaa
ttcttctag
DBGET
integrated database retrieval system
