Rhodamnia argentea (silver malletwood): 115742283
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Entry
115742283 CDS
T10595
Name
(RefSeq) cyclic nucleotide-gated ion channel 1 isoform X2
KO
K05391
cyclic nucleotide gated channel, plant
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04626
Plant-pathogen interaction
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09150 Organismal Systems
09159 Environmental adaptation
04626 Plant-pathogen interaction
115742283
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
rarg04040
]
115742283
Ion channels [BR:
rarg04040
]
Voltage-gated cation channels
Cyclic nucleotide-gated channel (CNG)
115742283
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Paralog
GFIT
Motif
Pfam:
Ion_trans
cNMP_binding
IQ
Motif
Other DBs
NCBI-GeneID:
115742283
NCBI-ProteinID:
XP_030532336
UniProt:
A0A8B8PC29
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Position
10:complement(20564694..20569722)
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AA seq
712 aa
AA seq
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MDYPSEKFVRFQPHSSDKANERRYGGNIGLRTGKFRNVLSSASEKFQQGFEFGSGRIKHI
GKSWKSCSFTTILAKVLRSRKRVLDPQGPFLQKWNKIFVLSCILAVSLDPLFFYVPIIDD
QRKCLGLDRKMEITASVLRSFTDIFYILHIIFQFSTGFIAPDSRVFGRGVLVEDTLAIAK
KYIASYFLIDILALLPLPQVVILIVIPKLRGSRSLNTKNLLKFIVFFQYIPRVLRIYPLY
KEVTRSSGILTETAWAGAAFNLILYMLASHVMGAFWYLSSIERETTCWQQACHQNVCNSV
SLYCDHPNQTVNAFLDTSCPIQTPNTTLFDFGIYLNALQARVVESTDFPQKFFFCFWWGL
QNLSSLGQNLKTSTYVWEICFAVFIAIAGLVLFSLLIGNMQTYLQSTTTRLEEMRVKRRD
AEQWMTHRLLPENLKDRIRRYEHYKWQETRGVDEDNLLRNLPKDLRRDIKCHLCLALLMR
VPIFEKMDDQLLDAMCDRLKPVLYTEDSYIVREGDPVDVMLFIMRGRLLTTTTNGGRTGF
FNLEYLKAGDFCGEELLTWALDPHSSANLPISTRTVQALTEVEAFALIADDLKFVASQFR
RLHSKQLRHTFRFYSQQWRTWAACFIQAAWRRYTRKKLEESLQEEENRLQDALAKGGGSS
PSLGATIYASRFAANALRVLRSKGSRKARMPERIPPMLLQKPAEPDFTAEEQ
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
atggattatccatcagagaaattcgtaaggtttcagccccatagttctgataaagctaat
gaaaggagatatggtggaaatataggattacggacagggaaatttagaaatgtcctaagt
tctgcctcagagaagtttcagcaaggcttcgaatttggttctggacgtataaaacatatt
ggaaaatcttggaaatcgtgttcttttactaccatcctggcgaaggtattgcgatccaga
aagagagttctcgatccccaaggtccatttcttcagaaatggaataagatatttgtgctt
tcgtgcattcttgctgtgtcattggaccccctgttcttctatgttcctattattgatgat
cagcggaagtgccttggcttggatagaaagatggagattacagccagtgtgttacgttcc
ttcacagatatcttttacatcctgcatatcatctttcaattcagcacaggcttcattgca
ccagattctcgagtgttcggaagaggtgttttagttgaagatacattggctatagcaaag
aagtacatagcttcgtactttctaattgacattctcgcgctccttcctcttccccaggtt
gtgattttgattgttattccaaaactgaggggttcgagatccttgaatacgaagaactta
ttgaaatttatagttttctttcaatacatcccaagggttcttcgtatatacccattgtac
aaagaagtaacaagaagttcaggcatcctcacagagactgcatgggctggagccgcgttt
aatcttatcctgtatatgcttgctagtcatgttatgggtgccttttggtacttatcctca
atagaacgagagaccacatgctggcagcaagcatgtcatcaaaatgtatgcaacagtgtt
tctctgtattgtgatcaccctaaccagacagtcaatgcattcctcgatacttcttgccct
atacagacaccaaatactactttatttgattttggaatatacctgaatgcccttcaagct
cgtgttgtggagtcaaccgattttccacagaaattctttttttgcttttggtggggactg
cagaatctgagttctcttggtcaaaaccttaagacaagtacatatgtctgggaaatctgc
tttgcagttttcattgccatcgctggcttggtgttgttttctcttctcattggaaatatg
cagacatatttgcaatcaacgacgacaagattggaggagatgagagtgaaaagaagagat
gcggagcagtggatgacccaccgtctgctgcctgagaatttgaaagacaggattaggagg
tacgaacactacaaatggcaggaaaccagaggtgttgatgaagacaatctactacgcaat
ctacccaaggatcttagaagggacatcaaatgccatctctgtttggctcttctcatgaga
gtgccaatatttgagaaaatggatgaccaactgttagatgcaatgtgcgaccgtcttaag
ccagttctttacacggaggacagctatatcgttcgggaaggggacccagttgatgtgatg
ctctttatcatgcgaggcaggctattgaccacaacgaccaatggtgggaggacgggattt
ttcaacttggaatatctcaaagctggtgacttttgtggagaagaacttctcacatgggca
cttgaccctcattcctcggcgaacctcccgatctcgacaagaacagtccaagccttaaca
gaagtggaagcttttgccctgatcgctgatgaccttaagtttgtcgcctctcaattccgg
cggcttcacagcaagcagctacgacacactttcaggttttactcacagcagtggaggaca
tgggcagcttgttttatacaagccgcgtggagacgttacacgagaaagaagctggaagag
tctcttcaagaggaggagaacaggttacaggatgctctggcgaaaggtggtgggagctca
ccaagtttaggtgccaccatctatgcatcccgttttgcagcaaatgcccttcgtgtctta
cgaagtaaagggtcgaggaaggcaaggatgccagagagaatacctccaatgctacttcag
aagccggcagagcccgactttactgctgaagagcaatag
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