Rhodamnia argentea (silver malletwood): 115742289
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Entry
115742289 CDS
T10595
Name
(RefSeq) RNA helicase aquarius
KO
K12874
intron-binding protein aquarius
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115742289
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
rarg03041
]
115742289
Spliceosome [BR:
rarg03041
]
Complex B
Other components
Prp19-related factors
115742289
Complex C
115742289
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Aquarius_N_1st
Aquarius_N_2nd
AAA_11
AAA_12
Aquarius_N_3rd
AAA_19
AAA_30
UvrD_C_2
ResIII
UvrD-helicase
AAA_22
SLFN-g3_helicase
AAA
AAA_16
Motif
Other DBs
NCBI-GeneID:
115742289
NCBI-ProteinID:
XP_030532350
UniProt:
A0A8B8PC05
LinkDB
All DBs
Position
5:1175781..1185382
Genome browser
AA seq
1554 aa
AA seq
DB search
MTKVYGTGTYDFKRHRVAEYPVESSHQLGDKPVESKPGSSLPGSITLSEIQRDRLTKIAA
ANWLVSGDDDEASRSRGPFDSALVKEIYETELVVKGGRKPVPLQRVMILEVSQYLENYLW
PNFDPQTATFEHVMSMILMVNEKFRENVAAWTCFYDRKDEFKGFLDRVLRLKEGRELSIP
EKTNYLVFMIYAFQSLEDEIVSETVLRLASLQSWHSLSFGRFQMELCLNPDLIKKWKRMI
KRESEDTTKHGEQFDPSCKLESKFLRNLMDEFLEVLDFKVFPRPDGDNGNDGTIDAYSPG
QVDDASVLYCERFIEFLIDLLSQLPTRRYLRPLVEDVAIVAKCHLSALYRHEKGKLFAQL
VDLLQFYEGFEINDHVGTQLTDDEVVQSHYDRFQSFQLLAFKKVPKLRELALANIGAIHK
RNDLSKKLSVLTKDELRDLVCHKLKLVSKEDPWSDRVDFLVEVMVSYFGKQQSQKEAINA
LPLYPNEQIMWDESLVPSINYSGEGCLALPKLNLQFLTLHDYLLRNFNLFRLESTYEIRE
DIQEAVPHLLAYINNEGETAFRGWSRMAVPFKEFKITEVKQPNIGEVKPASVTAEVTFSI
SSYKAQVRSEWNALKEHDVLFLLSIRPSFEPLSAEEASKASVPQRLGLQSVRGCEIIEIR
DEEGTLMNDFTGRIKRDEWKPPKGELRTVTVALDAAQYHMDVTDIAEKGSEDVYGTFNVL
MRRKPKENNFKAILESIRDLMNEYCIVPDWLHNIFLGYGNPSAAQWTNMPDLLDVVDFKD
TFLDANHLKESFSEYEVSFVNPDGSENSLPKPPFRIRLPRTLKANTHALPGNRKSDTSMD
DVAGSEKENLIVEAYIPPDPGPYPQDQPKQNSVRFTPTQVGAIISGIQPGLTMVVGPPGT
GKTDTAVQILNVLYHNCPSQRTLIITHSNQALNDLFEKIMERDVPARYLLRLGQGEQELA
TDLDFSRQGRVNAMLVRRLELLSEVERLARSLGLPEDVGYTCETAGYFWLLHVYSRWEQF
LAACADNEDKPTFVQDRFPFKEFFSDTPQPVFTGQSFEKDMRAAKGCFRHLKTMFQELEE
CRAFELLKSTADRANYLMTKQAKIVAMTCTHAALKRKDFLQLGFKYDNLLMEESAQILEI
ETFIPMLLQRQEDGYARLKRCILIGDHHQLPPVVKNMAFQKYSHMDQSLFTRFVRLGIPY
IELNAQGRARPSIAKLYNWRYRDLGDLPFLKEAAIFHKANAGFTYDYQLIDVPDYHGRGE
SAPSPWFYQNEGEAEYVVSVYMYMRLLGYPANKISILTTYNGQKLLIRDVINRRCAPYNF
IGPPSKVTTVDKFQGQQNDFILLSLVRTRFVGHLRDVRRLVVAMSRARLGLYVFCRRSLF
EQCYELQPTFRLLLQRPDHLALNLYEDTSYTDRHVEDTRDRYLVSGLEEMGSIVMDKIYR
LYQMRNPQWDQYVAYPEQVAGAVTDNGVPNDHMISTSSQETENASTPVPTGNKLGNMLAD
DEENNAAVHDSVNDKNGNLPLQNQQKGETEPEVHKSDGNGDMLESSNDETEMQE
NT seq
4665 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggtgtatggaaccggcacctacgacttcaagcgccaccgagtcgccgagtac
ccggtcgagtcgtcccaccagctcggcgacaagccggtggagtcgaagcccggttcgtcc
ctccccggctcgatcaccttgtcggagatccagcgcgaccgcctcaccaaaatcgcggcg
gccaattggctcgtttccggcgacgacgatgaggcgagcaggagcagggggccgttcgat
tcggcgctggtgaaggaaatttacgagacggagttggtggtgaagggcggaaggaagccg
gtgcccttgcagagggttatgattctcgaagtgagccagtacttggagaactacctgtgg
ccgaattttgacccgcagaccgcgactttcgagcatgtcatgtcgatgattctcatggtc
aatgaaaagtttcgagagaatgtggcagcttggacgtgcttttatgaccgaaaggatgag
ttcaagggatttcttgacagggttctccgtcttaaggagggaagggagttaagtatacca
gagaaaactaattacttggttttcatgatttatgcatttcagagtttggaagatgaaatt
gtcagtgaaactgttttgagattagcaagtctgcaatcctggcacagtttgtcgtttggt
cgtttccagatggagctttgcctcaaccctgatttgattaaaaaatggaaaaggatgata
aagagagagagtgaggataccacgaaacatggcgagcagtttgatccctcttgtaagttg
gagtcgaagttcttgaggaatctcatggatgagtttttggaggtactcgacttcaaggtt
ttcccccgaccggatggtgataatgggaatgatggaacaattgatgcctacagtcctgga
caagttgatgatgcttccgtcctatattgtgagaggtttatagaattcctcattgatctt
ctgagccagctgccaacaagaaggtatctgaggcctcttgtggaagatgtggccatcgtt
gccaaatgccatttaagtgccctgtatagacatgaaaaaggaaaactctttgcacaactt
gttgacttactacagttctacgaaggctttgaaattaatgaccatgtcggcacacaattg
acagatgatgaggtggttcagtctcattatgaccgctttcagtctttccagctactcgct
tttaagaaggtccccaagctgcgagaacttgcattggctaacatcggtgcaattcacaag
aggaacgatctttcaaagaaattgtctgtacttaccaaagatgagttgagggacttagtc
tgccacaagcttaagctggtatctaaggaagatccctggtcagatagggtggattttctt
gttgaagtgatggtatcctactttggaaaacaacagtctcagaaagaagctatcaatgcg
cttccactctaccccaatgagcagatcatgtgggatgaaagtcttgtaccaagcataaat
tactcgggggaaggttgtctggctcttcccaaactcaatttacagttcctgacactccat
gactatcttctaagaaattttaatctctttcgtcttgagtccacttatgagattcgcgag
gatattcaggaggctgtaccgcacctccttgcgtacatcaataatgaaggagaaactgca
ttccgtggttggtcgaggatggctgtgccattcaaagaatttaagataacagaggtaaag
cagccgaatattggtgaggttaagcctgcgtctgtgacagccgaagtaacttttagcatc
tccagttataaagctcaagtaagatcagagtggaatgccctcaaagagcatgatgtccta
tttttgctctctatccgtccttcatttgagcctcttagtgcagaggaagcgtcaaaagct
agtgtgccacagaggcttggccttcagtctgtgaggggatgtgaaattattgagatccgt
gatgaagagggaactctaatgaatgattttacgggaagaatcaaacgcgatgagtggaag
cccccaaagggtgaattgaggactgttactgttgctctggatgcagcgcagtaccatatg
gatgtcaccgatattgcggaaaaaggttcagaggatgtttatggcacatttaatgtattg
atgaggagaaaacccaaggaaaacaacttcaaggcaatactggaatccataagggatcta
atgaatgagtattgcattgttcctgactggttgcacaacatatttctgggctacgggaat
ccttctgctgcacagtggactaatatgcctgatcttcttgacgttgtagattttaaagat
actttccttgacgcaaaccatttaaaagagagtttctcggaatatgaggtgtccttcgtg
aatccagatggctcggaaaactccctaccgaaacccccttttcgcataagacttccgagg
actttgaaagccaatactcacgctcttcctgggaacaggaaatctgatacttctatggat
gatgtcgctggttctgaaaaggaaaatctcattgttgaagcttatattccccctgatcca
ggtccttatccccaagatcagccgaagcaaaattctgttagattcacacctacacaggtt
ggggcaattatatcaggcatccaacctggactgacgatggttgttggtccgcctggtact
ggaaagactgatacagcagtgcagatattgaatgttctttatcacaattgtccttctcag
agaacgttgataatcacccattcaaatcaggctcttaatgacctttttgagaagattatg
gagagggatgtgcctgcacgctatcttcttcggctaggtcaaggagaacaagaactggca
actgatctggacttcagcaggcaaggtcgtgtcaatgcgatgcttgttcggcgattagaa
ttgcttagtgaagtggaaaggctggcaagatcgcttggactgcctgaggatgtgggctac
acttgtgaaacagctggttacttttggttgctccatgtatattcacgttgggagcaattt
cttgctgcttgtgctgataatgaagataaacctacatttgttcaagatcgtttccccttt
aaggagttcttctctgacactcctcagcctgtttttactggtcagtcatttgaaaaggac
atgcgagctgctaaagggtgttttcgccatcttaaaaccatgtttcaggagcttgaagag
tgtagggcatttgaattgctcaagtcaacagctgatcgagcaaattacttgatgaccaag
caggcaaagattgtggcaatgacttgcactcatgcagcccttaaaaggaaagattttctt
cagttaggtttcaagtatgacaacttgttgatggaagaaagtgcccaaatactagaaatt
gagactttcatcccaatgttgcttcagagacaggaagatggttacgcacgccttaaacgc
tgtatattgattggtgatcaccatcagttgcctccagttgtaaagaatatggctttccag
aagtacagccacatggatcagagcctcttcactaggtttgttcgtctgggtataccctac
attgagcttaatgcacagggtagagccaggccaagcattgccaaactttataactggagg
taccgtgatttgggagaccttccttttctgaaggaggctgccatcttccacaaagccaat
gctgggttcacttacgattatcaattaattgacgtgcctgattaccatgggagaggtgag
agtgccccttccccctggttctatcagaatgaaggagaggctgaatatgtagttagtgtc
tatatgtacatgcgcttactagggtacccggcaaataagatttccatcttgaccacttac
aatggccagaaacttttgatccgtgacgttatcaacagacgatgtgctccttataacttc
atcggtcctcccagcaaggtcactacagttgataagttccaaggtcagcaaaatgatttc
atcttgctgtctcttgtgcgtactcgctttgttggacaccttcgtgatgttagacgatta
gttgttgccatgtcccgtgcccgacttgggttgtatgttttttgtcgccgctctttgttt
gagcaatgctacgagctacagccaacattccggctattacttcaaaggcctgaccatctt
gcgctgaatctctacgaggatacatcatataccgatcggcacgttgaagacacaagagat
aggtatctagtcagtggtcttgaggagatgggcagcattgtcatggataagatatatcgc
ctatatcagatgaggaacccccaatgggatcaatatgtggcttatcctgaacaagtagct
ggtgccgtgactgacaatggagttcctaatgaccatatgatttcaacttcttcacaggaa
actgagaatgctagcacgcctgtgcctacgggtaacaaattgggaaatatgcttgccgat
gatgaagagaataatgcagcagtccatgattctgtaaatgataaaaatggaaatttgcct
cttcagaatcaacagaaaggggaaactgagccggaagtccataaatctgatggaaatggt
gacatgctagagagctcgaacgatgagacagagatgcaggagtag
DBGET
integrated database retrieval system
