Rhodamnia argentea (silver malletwood): 115742468
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Entry
115742468 CDS
T10595
Name
(RefSeq) protein TRANSPORT INHIBITOR RESPONSE 1
KO
K14485
transport inhibitor response 1
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
115742468
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
rarg04121
]
115742468
Ubiquitin system [BR:
rarg04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
115742468
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GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
115742468
NCBI-ProteinID:
XP_030532623
UniProt:
A0A8B8PEX1
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Position
7:complement(26493720..26497613)
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AA seq
634 aa
AA seq
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MYFCHFMQLTDNQRLALSSSVCPSRSNPTSLSLSLSLSQPIKKPSSILCSRVFMAHLFPE
EVLEHVFSFIGSDRDRNAISLVCKSWYEIERWCRRRVFVGNCYAVSPAAVVRRFPEVRSV
ELKGKPHFADFNLVPEGWGGYVSPWIAAMARAYPWLEEIRLKRMVVTDDNLELIARSFKN
FKVLVLSFCEGFSTGGLAAVAANCRNLRELDLRESEVEDMGGHWLSHFPDSYTSLVSLNI
SCLGSEVSFSALERLVGRCPNLRSLRLNRTVPLDRLANLLRRAPQLAELGTGVYSAELRS
DDFSNLVGALAGCRELRSLSGFWDVVPAYLPAVYPLCSGLTSLNLSYATIQSSELTKLIS
QCHRLQRLLVLDYIEDSGLEALAASCKDLRELRVFPSEPFNREPNVSLTEQGLVSVSEGC
PKLQSVLYFCRQMSNAALVTIARNRPNMTRFRLCIIEPRCPDYLTLEPLDTGFGAIVQQC
KDLKRLSLSGLLTDRVFEYIGTYAKKLEMLSVAFAGDSDLGLHHVLSGCDSLRKLEIRDC
PFGDKALLANAAKLETMRSLWMSSCSVSFGACKLLGQKMPRLNVEVIDEEGHPDSRPESC
PVEKLYIYRTVAGPRFDMPDFVWTMDEDSALRPS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atgtatttttgccattttatgcagctcacagacaaccaaagactcgcactgagctcctct
gtatgcccatccagatctaaccccacttctctctctctctctctctctctctctcagcca
atcaagaagccaagctccattctttgctcgcgagttttcatggcgcacttgttcccggag
gaggtgctggagcacgtgttctccttcatcggctccgacagggaccgcaatgccatctcc
ctggtgtgcaagtcgtggtatgagatcgagcgctggtgccggaggcgcgtcttcgtcggc
aactgctacgccgtcagccccgcggccgtcgtccggcgcttcccggaggtgagatccgtg
gagctcaagggcaagccccacttcgccgacttcaacctcgtccccgagggctggggcggc
tacgtctccccctggatcgccgccatggcccgcgcctacccttggctcgaggagattcgg
ctcaagaggatggtggtcaccgacgacaacttggagctgatcgccaggtcgttcaagaac
ttcaaggtcttggttttgtccttttgcgaggggttctccacaggcgggctcgccgccgtt
gccgctaattgcaggaacttgagggagcttgacttacgggagagtgaagtggaagatatg
ggtggacattggctcagtcatttccccgattcatatacgtcactcgtatccctcaacatt
tcctgcttaggctccgaggtgagcttctctgccttggagcgcctggtgggtcgctgcccc
aacctgaggtctctccgacttaaccgcactgtgcctcttgatcgccttgccaatttactt
cgacgggccccacagttggctgaattaggcacgggcgtttactctgctgaactgaggtca
gatgatttctcgaatctagttggcgctctagctggctgccgagagctgagaagtctgtct
ggcttttgggatgtagtacctgcttatcttccagctgtatatcccctatgctcagggctt
acatcgttgaacttgagctacgctaccatccaaagctctgaacttacaaaacttatcagt
caatgtcaccgtctgcagcgcctattggtacttgattatattgaagacagcggtttggaa
gccctggctgcgtcttgcaaagatttacgggaattgagggtgtttccttctgagcccttc
aaccgtgaaccaaatgtatctttaacagagcagggcctcgtgtcagtgtctgagggttgc
cccaagcttcagtcagttttgtacttctgccgccagatgtctaatgcggccttggttacc
atagctcggaaccgtcctaacatgactcgattccgactttgtatcattgaaccacgttgc
cctgattatttaactcttgagccactcgatacaggctttggagccattgtccaacagtgc
aaggatctcaagcgtctctctctatcaggtcttctaaccgaccgcgtgtttgagtacata
gggacttatgcgaagaagcttgagatgctttctgtggcattcgctggagacagtgacttg
ggactgcaccatgtgctatcggggtgcgacagtcttagaaaattagagatccgggactgc
ccgtttggtgacaaggcgctcttggccaatgctgcaaagctggagacaatgcgatccctt
tggatgtcttcttgctcagtgagcttcggagcatgtaagctgcttggtcagaagatgccc
aggcttaatgttgaagtcattgacgaggaaggccacccggattcgaggcctgaaagctgc
cctgttgagaagctttacatctatagaacggttgcggggccgaggttcgacatgcctgat
tttgtttggacaatggatgaggattctgctctgaggccttcttga
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