Rhodamnia argentea (silver malletwood): 115743086
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Entry
115743086 CDS
T10595
Name
(RefSeq) pre-mRNA cleavage factor Im 25 kDa subunit 2-like isoform X1
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115743086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rarg03019
]
115743086
Messenger RNA biogenesis [BR:
rarg03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
115743086
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Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
115743086
NCBI-ProteinID:
XP_030533546
UniProt:
A0A8B8PFH1
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Position
3:complement(28726386..28730093)
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AA seq
200 aa
AA seq
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MVSSPVVNMYPLSSYTFGTKEPKMEKDTSVADRLARMKVNYMKEGMRTSVEGILLVQEHR
HPHILLLQIGNTFCKLPGGRLKPGENEIEGLKRKLSSKLGANPLSLQPSWQIGECVAIWW
RPNFETVMYPYCPPHITKPKECKKLFIVHLSEREYFAVPKNLKLLAVPLFELYDNVHRYG
PVISTIPQQLSRFQFNMMTT
NT seq
603 nt
NT seq
+upstream
nt +downstream
nt
atggtgagttcaccagtggtcaacatgtacccgctctccagctacaccttcggtacgaaa
gagccgaagatggagaaagacacctccgtcgctgatcgcctcgctcgcatgaaagtcaac
tacatgaaagagggaatgaggaccagtgttgaaggcattctgctggtgcaggagcacaga
catcctcatattctcctcctgcaaattgggaacacattttgtaaacttccaggaggacgt
ttgaaaccaggagaaaatgagattgaaggtttgaaaaggaaactatcaagcaaattaggt
gcaaatccactatcactgcaacccagttggcagattggcgagtgtgttgctatttggtgg
agaccaaactttgagactgttatgtatccatactgccctccccacataacaaagccaaag
gagtgcaagaaacttttcatcgtccatttgtctgaaagagaatattttgctgtaccgaag
aacttgaaattgctagccgttccgttgtttgagctctatgacaacgtgcatagatatgga
ccagttatctccaccatacctcagcagctctcaaggtttcagttcaacatgatgaccaca
taa
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