Rhodamnia argentea (silver malletwood): 115743205
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Entry
115743205 CDS
T10595
Name
(RefSeq) SNF2 domain-containing protein CLASSY 4-like isoform X1
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
rarg Rhodamnia argentea (silver malletwood)
Pathway
rarg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rarg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115743205
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rarg03400
]
115743205
DNA repair and recombination proteins [BR:
rarg03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
115743205
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
ResIII
Motif
Other DBs
NCBI-GeneID:
115743205
NCBI-ProteinID:
XP_048131838
UniProt:
A0ABM3H5H6
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All DBs
Position
3:29757683..29763455
Genome browser
AA seq
1307 aa
AA seq
DB search
MRYSLPVAKRTRAQTRSSRRDRHQREEIIVDEVDEGVEFLGEADLIVENWRNSSRGLAEA
EDVISIDSVDSADLGNGGGVPVVGESGFLDSAQSSSCIGKLGRRRKDYSHVDCDEGDVSS
YKPVDVSTVLNSDSTMCRKKEGPLKNSGAPVFVQDGSIGESSGFKCDSGKKVNLTSSPGG
DMVETGAWKVDEEHSYIEITDVSDETETSSNVDEMETSSSEDEMSSSEDNNADSEDEDYV
GEKSTSSVSTDNSSSSSEEEAGDGKDASECEIMKEESAFDGPQEGKPVPNLKRRKASQCD
ITEEESASDRPREGIPVPDLKKRKVLGLKILTSSPRGEDDDKESDVNVGEERTCVALRTR
SHFGRQGRDMMKVGTCSHPICLDDDDDLGLSHKYCVKCEFLINPDSHHVREKTYFGAMSN
YRKARSKSVRDQSMDVKDDDISDSENRNPESFSCKSIKRKAGSNIDDGAECPQKECGKGE
DIPSMKRKAGSNIDNAAECLRRECGKGEDFPFLAKRKRVRSPQDDDVIKILVDSIWDKVE
ISPKKADAFRDATCEGETNRQSSGCILPLKFTFGEGEPEQLEKSDYEKELDKLWDELDFC
LRTREIDSYNANLVESKDVDPQPDFDRVTLCSQGNHEFILDEEIGVRCKQCFFLKLEIKY
HAPSLSTDPLEKSGRRVCGRYYHEDYLLEKLRSQDSSCDLQAGLPSANVHGTVWDLIPGV
RSNLYPHQREGFEFIWKNIAGGIQLDELRKQTTVGCDGGCIISHAPGTGKSRLTIVFLQT
YMELFPRCRPVIIAPRSMLLTWEEEFQKWNKDIAFHNLNNPEFSGKESKTAMSLLRLHKI
GDPSKKYVRMAKLYSWRKESSILGISYALFRSLTGQNRKDGTPRNKTEDEQGKILLKIPD
LLVLDEGHTPRNDRSLLWKALCKVETQRRIILSGTPFQNNFDELFNTLCLARPKFAERIS
LGRFGNFPRKRGRKRSKLRGEWDVMTQSIVKKKNDGLEKLKAMIDPFVHVHKGTILKERL
PGLRDSVIVLRPGELQKSLLGNVQSVKNTFSLSHLVSSISVHPFLFSQCSVSESEGLTVD
RSNLESLREKPEAGVKTRFLMELIRLSEAMHEKVLVFSQFIDPLTFIRDLLKSTFHWADG
KELLYMDGQADIKQRQSSINAFNDPTSEVRVLLASTRACSEGINLVGASRVVLLDVVWNP
SVERQAISRAYRLGQENVVYIYHLITSGTIEAEKYCRQVEKDRLSELVFASSDPGQKVTS
AGPDDKILEELIHHPNLSDMFERIIHQPKESNLIETFNLVDVSQASV
NT seq
3924 nt
NT seq
+upstream
nt +downstream
nt
atgaggtatagcctgccggttgcgaagagaactcgggctcaaacccgttcaagtcgtcgc
gatcgtcatcagagggaggaaataattgtggatgaagttgatgagggtgtggaattttta
ggggaagcggatttgatagtggagaattggcggaattcaagtaggggtttggcagaagcg
gaggatgttatatcgattgactcggttgattctgctgatttgggcaatggtggtggggtg
cctgtggttggggagagcggatttcttgattccgctcaatcgagttcttgcattgggaaa
ttaggtaggaggcgcaaggattattcccatgttgattgtgatgaaggggatgtttctagt
tataagccagttgatgttagtactgtcttgaactctgattctacaatgtgtaggaagaaa
gagggtcctcttaagaatagtggggctcctgtgtttgtgcaggatggaagcattggtgaa
agtagtggcttcaaatgtgacagtggaaagaaggtaaatttgacgtcctctcctggtgga
gatatggtagaaaccggtgcctggaaggttgatgaggaacacagctacattgaaattacg
gatgtgtcagatgagacggagacgtcctctaatgtggatgagatggagacatcctctagt
gaggatgagatgtcgtccagtgaggataacaatgcagattctgaggatgaggattatgtg
ggcgagaagtcaacgagttctgttagcacggacaactcaagttcttctagtgaggaggaa
gcaggagatgggaaagacgcaagcgaatgtgagattatgaaagaagaaagtgcttttgat
ggacctcaagaagggaaacctgtgcccaatttgaaaaggaggaaagcaagccaatgtgac
attacagaagaagaaagcgcttctgacagacctcgagaagggatacccgtgcccgatttg
aagaagaggaaagtattgggtttgaaaatcctgactagttctcctagaggtgaagatgac
gacaaagaaagtgatgttaatgtcggtgaagagcgcacttgtgtggcactacgaactcga
tcacattttggtaggcaagggagggatatgatgaaggttggcacatgcagccatccaatc
tgccttgatgatgatgatgatcttggcttatctcataagtactgtgtcaaatgtgaattt
ctcattaatccggacagtcaccatgtaagagaaaaaacttattttggtgcgatgtcaaac
tatagaaaagctagatcaaagtcagttagagatcaatctatggatgttaaagatgatgac
atctctgatagtgaaaaccgcaaccctgaaagcttttcatgcaaatccattaagaggaaa
gctggttcaaacattgatgatggtgctgaatgtccgcaaaaggaatgtggaaaaggtgaa
gatattccatccatgaagagaaaagctggttcaaacatcgataatgctgcggaatgtcta
cgaagggaatgtgggaaaggtgaagattttccattcctagccaagagaaagcgtgttcgt
tctccccaagatgatgatgtcatcaaaattctggtggattctatttgggataaggtggag
ataagccccaaaaaagcagatgcttttagagatgcaacttgtgaaggagaaaccaatagg
caaagcagtggatgcattcttccattgaaatttacttttggagaaggggaaccagagcag
ctggagaaatcagattacgagaaagaactggacaagctgtgggatgagcttgacttttgt
ctccggactcgtgagatcgactcttataatgccaatctggttgaaagtaaagatgttgac
cctcagcccgactttgatagagtgaccctttgtagtcaggggaatcatgagtttattctc
gatgaagaaattggagtcagatgcaaacagtgcttctttctgaagctggagatcaaatat
catgcaccatcattaagtactgatcctctggaaaagtcagggcgaagagtctgtggtaga
tattaccatgaggactatttgcttgaaaaacttcgctctcaagactccagttgcgatctc
caagctggccttccctcagccaatgtgcatggtacggtttgggacttaattcctggcgta
agaagcaacttgtatccacatcaacgtgaaggctttgagttcatttggaagaatatagca
ggaggaattcagcttgatgagctgagaaagcaaacaacagttggctgcgatggtggatgt
atcatatcacatgctcctggaacgggaaagtctcggctgactatcgtttttcttcaaacg
tatatggaactgtttccacgttgcaggcctgtgatcattgctcctcggagcatgctcctc
acgtgggaagaagagtttcaaaagtggaacaaggatatagcatttcataatctcaacaat
cccgagttttctgggaaggaaagtaagacagctatgagtcttttaaggctacataaaatt
ggggacccgagcaaaaaatatgttcgtatggcgaagctgtattcgtggaggaaagaaagc
agcatcctgggaataagttacgcactcttcaggtcccttacggggcaaaataggaaagac
ggtacgcctcgaaataaaactgaagatgagcaggggaaaatacttctaaagattcctgat
cttttagtccttgatgaaggacatactcctcgcaatgaccggagcctgctctggaaggct
ttgtgtaaagtggaaacgcaaagacgcatcattctgtccggaactcctttccagaataat
tttgatgagctctttaataccctctgcttggcgaggccaaaatttgctgaaagaatttca
ttgggacgctttggcaatttccctagaaagcgtggacgcaaaagaagcaagttgagaggg
gagtgggatgtgatgacccaatccatagtgaaaaagaaaaacgatggactagaaaagctc
aaagctatgattgacccattcgtgcatgtacacaaaggtaccatacttaaagaaagactt
cctgggttgcgggactctgtgattgttctccggccaggggaattacagaagagcctcctt
ggtaatgtgcaaagtgtgaagaacacattttcgttgagtcaccttgtctcctcaatatcc
gttcatccatttctcttctctcagtgctctgtatctgagagtgaagggttaacagttgac
agaagtaacttagaaagccttagagagaaacccgaagctggggtcaaaaccagatttcta
atggaactcatccgtcttagtgaggcaatgcatgagaaggtcctggtttttagccaattc
attgatcccttgaccttcataagggacctgctcaagtccacttttcattgggcggatggc
aaggaactcttatacatggatggacaggctgacatcaagcagcgccaatcctccattaat
gccttcaatgacccaacgagtgaagtgagggtgttgcttgcttctacaagagcatgttcc
gaagggattaatctggtgggcgcttctagggtcgtgttactggatgttgtgtggaatccg
tcagttgagaggcaggccataagccgtgcctacagacttggacaggagaatgtggtctat
atttatcatctgattacttccgggacaatagaggctgagaaatactgtcgacaagtggag
aaagacagattgtctgagttggtgttcgcctcatcggatcctgggcaaaaagtcacatcg
gcaggaccggatgataaaattctggaagagctgatacatcatcctaacctcagcgatatg
tttgaaaggattattcaccagcccaaggagtctaacttgatcgagacatttaatttggtg
gacgtttcacaggcatctgtttag
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